Gene : E2F1 A. thaliana TAIR10
Primary Identifier:  ? AT5G22220 Defline:  (1 of 3) K06620 - transcription factor E2F3 (E2F3)
Genomic Order:  2090 Name:  ? AT5G22220
Secondary Identifier:  ? PAC:19667892
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22220 0.5kb upstream 0.5kb upstream 4420 true Chr5: 7360035-7364454 Arabidopsis thaliana
AT5G22220 0.5kb upstream 0.5kb upstream 500 false Chr5: 7360035-7360534 Arabidopsis thaliana
AT5G22220 0.5kb downstream 0.5kb downstream 4420 true Chr5: 7360535-7364954 Arabidopsis thaliana
AT5G22220 0.5kb downstream 0.5kb downstream 500 false Chr5: 7364455-7364954 Arabidopsis thaliana
AT5G22220 1.0kb upstream 1.0kb upstream 4920 true Chr5: 7359535-7364454 Arabidopsis thaliana
AT5G22220 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7359535-7360534 Arabidopsis thaliana
AT5G22220 1.0kb downstream 1.0kb downstream 4920 true Chr5: 7360535-7365454 Arabidopsis thaliana
AT5G22220 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7364455-7365454 Arabidopsis thaliana
AT5G22220 2.0kb upstream 2.0kb upstream 5920 true Chr5: 7358535-7364454 Arabidopsis thaliana
AT5G22220 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7358535-7360534 Arabidopsis thaliana
AT5G22220 2.0kb downstream 2.0kb downstream 5920 true Chr5: 7360535-7366454 Arabidopsis thaliana
AT5G22220 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7364455-7366454 Arabidopsis thaliana
AT5G22220 5.0kb upstream 5.0kb upstream 8920 true Chr5: 7355535-7364454 Arabidopsis thaliana
AT5G22220 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7355535-7360534 Arabidopsis thaliana
AT5G22220 5.0kb downstream 5.0kb downstream 8920 true Chr5: 7360535-7369454 Arabidopsis thaliana
AT5G22220 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7364455-7369454 Arabidopsis thaliana
AT5G22220 10.0kb upstream 10.0kb upstream 13920 true Chr5: 7350535-7364454 Arabidopsis thaliana
AT5G22220 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7350535-7360534 Arabidopsis thaliana
AT5G22220 10.0kb downstream 10.0kb downstream 13920 true Chr5: 7360535-7374454 Arabidopsis thaliana
AT5G22220 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7364455-7374454 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375863 5261 Brassicaceae View MSA
123827404 5264 Brassicales-Malvales View MSA
124342335 5266 SBM View MSA
124238173 5268 Malvidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.613        
cufflinks 1.002        
cufflinks 0.456       Low
cufflinks 1.079        
cufflinks 0.433       Low
cufflinks 1.022        

0 Strain