Gene : NIT4 A. thaliana TAIR10
Primary Identifier:  ? AT5G22300 Defline:  (1 of 1) 4.2.1.65 - 3-cyanoalanine hydratase
Genomic Order:  2097 Name:  ? AT5G22300
Secondary Identifier:  ? PAC:19669797
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ASPARAGINE-DEG1-PWY Arabidopsis thaliana pathologic  
Athaliana ASPSYNII-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22300 0.5kb upstream 0.5kb upstream 3237 true Chr5: 7378699-7381935 Arabidopsis thaliana
AT5G22300 0.5kb upstream 0.5kb upstream 500 false Chr5: 7378699-7379198 Arabidopsis thaliana
AT5G22300 0.5kb downstream 0.5kb downstream 3237 true Chr5: 7379199-7382435 Arabidopsis thaliana
AT5G22300 0.5kb downstream 0.5kb downstream 500 false Chr5: 7381936-7382435 Arabidopsis thaliana
AT5G22300 1.0kb upstream 1.0kb upstream 3737 true Chr5: 7378199-7381935 Arabidopsis thaliana
AT5G22300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7378199-7379198 Arabidopsis thaliana
AT5G22300 1.0kb downstream 1.0kb downstream 3737 true Chr5: 7379199-7382935 Arabidopsis thaliana
AT5G22300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7381936-7382935 Arabidopsis thaliana
AT5G22300 2.0kb upstream 2.0kb upstream 4737 true Chr5: 7377199-7381935 Arabidopsis thaliana
AT5G22300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7377199-7379198 Arabidopsis thaliana
AT5G22300 2.0kb downstream 2.0kb downstream 4737 true Chr5: 7379199-7383935 Arabidopsis thaliana
AT5G22300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7381936-7383935 Arabidopsis thaliana
AT5G22300 5.0kb upstream 5.0kb upstream 7737 true Chr5: 7374199-7381935 Arabidopsis thaliana
AT5G22300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7374199-7379198 Arabidopsis thaliana
AT5G22300 5.0kb downstream 5.0kb downstream 7737 true Chr5: 7379199-7386935 Arabidopsis thaliana
AT5G22300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7381936-7386935 Arabidopsis thaliana
AT5G22300 10.0kb upstream 10.0kb upstream 12737 true Chr5: 7369199-7381935 Arabidopsis thaliana
AT5G22300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7369199-7379198 Arabidopsis thaliana
AT5G22300 10.0kb downstream 10.0kb downstream 12737 true Chr5: 7379199-7391935 Arabidopsis thaliana
AT5G22300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7381936-7391935 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374237 5261 Brassicaceae View MSA
123835096 5264 Brassicales-Malvales View MSA
124343016 5266 SBM View MSA
124248839 5268 Malvidae View MSA
124063597 5270 Rosid View MSA
123751549 5271 Pentapetalae View MSA
122796633 5272 Eudicot View MSA
122043736 5273 Angiosperm View MSA
121347314 5274 Embryophyte View MSA
123380526 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.14        
cufflinks 0.536        
cufflinks 6.708        
cufflinks 5.344        
cufflinks 26.523     High High
cufflinks 0.041     Low Low

0 Strain