Gene : AT5G22100 A. thaliana TAIR10
Defline:  (1 of 1) 6.5.1.4 - RNA 3'-terminal-phosphate cyclase (ATP) / RNA-3'-phosphate cyclase Genomic Order:  2078
Name:  ? AT5G22100 Secondary Identifier:  ? PAC:19668850
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G22100 0.5kb upstream 0.5kb upstream 2470 true Chr5: 7328461-7330930 Arabidopsis thaliana
AT5G22100 0.5kb upstream 0.5kb upstream 500 false Chr5: 7328461-7328960 Arabidopsis thaliana
AT5G22100 0.5kb downstream 0.5kb downstream 2470 true Chr5: 7328961-7331430 Arabidopsis thaliana
AT5G22100 0.5kb downstream 0.5kb downstream 500 false Chr5: 7330931-7331430 Arabidopsis thaliana
AT5G22100 1.0kb upstream 1.0kb upstream 2970 true Chr5: 7327961-7330930 Arabidopsis thaliana
AT5G22100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7327961-7328960 Arabidopsis thaliana
AT5G22100 1.0kb downstream 1.0kb downstream 2970 true Chr5: 7328961-7331930 Arabidopsis thaliana
AT5G22100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7330931-7331930 Arabidopsis thaliana
AT5G22100 2.0kb upstream 2.0kb upstream 3970 true Chr5: 7326961-7330930 Arabidopsis thaliana
AT5G22100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7326961-7328960 Arabidopsis thaliana
AT5G22100 2.0kb downstream 2.0kb downstream 3970 true Chr5: 7328961-7332930 Arabidopsis thaliana
AT5G22100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7330931-7332930 Arabidopsis thaliana
AT5G22100 5.0kb upstream 5.0kb upstream 6970 true Chr5: 7323961-7330930 Arabidopsis thaliana
AT5G22100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7323961-7328960 Arabidopsis thaliana
AT5G22100 5.0kb downstream 5.0kb downstream 6970 true Chr5: 7328961-7335930 Arabidopsis thaliana
AT5G22100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7330931-7335930 Arabidopsis thaliana
AT5G22100 10.0kb upstream 10.0kb upstream 11970 true Chr5: 7318961-7330930 Arabidopsis thaliana
AT5G22100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7318961-7328960 Arabidopsis thaliana
AT5G22100 10.0kb downstream 10.0kb downstream 11970 true Chr5: 7328961-7340930 Arabidopsis thaliana
AT5G22100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7330931-7340930 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026420 5273 Angiosperm View MSA
122363198 5261 Brassicaceae View MSA
123831400 5264 Brassicales-Malvales View MSA
124344225 5266 SBM View MSA
124242292 5268 Malvidae View MSA
124066416 5270 Rosid View MSA
123740049 5271 Pentapetalae View MSA
122791939 5272 Eudicot View MSA
121344300 5274 Embryophyte View MSA
123427148 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.243        
cufflinks 9.714        
cufflinks 4.994        
cufflinks 9.907        
cufflinks 3.926       Low
cufflinks 11.299       High

0 Strain