Gene : AT5G21060 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21499//PTHR21499:SF33 - ASPARTATE KINASE // HOMOSERINE DEHYDROGENASE Genomic Order:  2039
Name:  ? AT5G21060 Secondary Identifier:  ? PAC:19671524
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana HOMOSERSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3001 Arabidopsis thaliana pathologic  
Athaliana PWY-724 Arabidopsis thaliana pathologic  
Athaliana THRESYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G21060 0.5kb upstream 0.5kb upstream 4399 true Chr5: 7148978-7153376 Arabidopsis thaliana
AT5G21060 0.5kb upstream 0.5kb upstream 500 false Chr5: 7152877-7153376 Arabidopsis thaliana
AT5G21060 0.5kb downstream 0.5kb downstream 4399 true Chr5: 7148478-7152876 Arabidopsis thaliana
AT5G21060 0.5kb downstream 0.5kb downstream 500 false Chr5: 7148478-7148977 Arabidopsis thaliana
AT5G21060 1.0kb upstream 1.0kb upstream 4899 true Chr5: 7148978-7153876 Arabidopsis thaliana
AT5G21060 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7152877-7153876 Arabidopsis thaliana
AT5G21060 1.0kb downstream 1.0kb downstream 4899 true Chr5: 7147978-7152876 Arabidopsis thaliana
AT5G21060 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7147978-7148977 Arabidopsis thaliana
AT5G21060 2.0kb upstream 2.0kb upstream 5899 true Chr5: 7148978-7154876 Arabidopsis thaliana
AT5G21060 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7152877-7154876 Arabidopsis thaliana
AT5G21060 2.0kb downstream 2.0kb downstream 5899 true Chr5: 7146978-7152876 Arabidopsis thaliana
AT5G21060 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7146978-7148977 Arabidopsis thaliana
AT5G21060 5.0kb upstream 5.0kb upstream 8899 true Chr5: 7148978-7157876 Arabidopsis thaliana
AT5G21060 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7152877-7157876 Arabidopsis thaliana
AT5G21060 5.0kb downstream 5.0kb downstream 8899 true Chr5: 7143978-7152876 Arabidopsis thaliana
AT5G21060 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7143978-7148977 Arabidopsis thaliana
AT5G21060 10.0kb upstream 10.0kb upstream 13899 true Chr5: 7148978-7162876 Arabidopsis thaliana
AT5G21060 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7152877-7162876 Arabidopsis thaliana
AT5G21060 10.0kb downstream 10.0kb downstream 13899 true Chr5: 7138978-7152876 Arabidopsis thaliana
AT5G21060 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7138978-7148977 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373451 5261 Brassicaceae View MSA
123833269 5264 Brassicales-Malvales View MSA
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.616       High
cufflinks 1.715        
cufflinks 2.242        
cufflinks 1.6       Low
cufflinks 2.2        
cufflinks 1.767        

0 Strain