Gene : AT5G21105 A. thaliana TAIR10
Defline:  (1 of 3) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  2044
Name:  ? AT5G21105 Secondary Identifier:  ? PAC:19671414
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G21105 0.5kb upstream 0.5kb upstream 5655 true Chr5: 7172187-7177841 Arabidopsis thaliana
AT5G21105 0.5kb upstream 0.5kb upstream 500 false Chr5: 7172187-7172686 Arabidopsis thaliana
AT5G21105 0.5kb downstream 0.5kb downstream 5655 true Chr5: 7172687-7178341 Arabidopsis thaliana
AT5G21105 0.5kb downstream 0.5kb downstream 500 false Chr5: 7177842-7178341 Arabidopsis thaliana
AT5G21105 1.0kb upstream 1.0kb upstream 6155 true Chr5: 7171687-7177841 Arabidopsis thaliana
AT5G21105 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7171687-7172686 Arabidopsis thaliana
AT5G21105 1.0kb downstream 1.0kb downstream 6155 true Chr5: 7172687-7178841 Arabidopsis thaliana
AT5G21105 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7177842-7178841 Arabidopsis thaliana
AT5G21105 2.0kb upstream 2.0kb upstream 7155 true Chr5: 7170687-7177841 Arabidopsis thaliana
AT5G21105 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7170687-7172686 Arabidopsis thaliana
AT5G21105 2.0kb downstream 2.0kb downstream 7155 true Chr5: 7172687-7179841 Arabidopsis thaliana
AT5G21105 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7177842-7179841 Arabidopsis thaliana
AT5G21105 5.0kb upstream 5.0kb upstream 10155 true Chr5: 7167687-7177841 Arabidopsis thaliana
AT5G21105 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7167687-7172686 Arabidopsis thaliana
AT5G21105 5.0kb downstream 5.0kb downstream 10155 true Chr5: 7172687-7182841 Arabidopsis thaliana
AT5G21105 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7177842-7182841 Arabidopsis thaliana
AT5G21105 10.0kb upstream 10.0kb upstream 15155 true Chr5: 7162687-7177841 Arabidopsis thaliana
AT5G21105 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7162687-7172686 Arabidopsis thaliana
AT5G21105 10.0kb downstream 10.0kb downstream 15155 true Chr5: 7172687-7187841 Arabidopsis thaliana
AT5G21105 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7177842-7187841 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378805 5261 Brassicaceae View MSA
123833717 5264 Brassicales-Malvales View MSA
124345960 5266 SBM View MSA
124242073 5268 Malvidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.255        
cufflinks 20.018        
cufflinks 2.62       Low
cufflinks 23.127        
cufflinks 3.085        
cufflinks 26.365       High

0 Strain