Gene : AGO9 A. thaliana TAIR10
Primary Identifier:  ? AT5G21150 Defline:  (1 of 3) PTHR22891//PTHR22891:SF20 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // PROTEIN ARGONAUTE 4-RELATED
Genomic Order:  2050 Name:  ? AT5G21150
Secondary Identifier:  ? PAC:19669552
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G21150 0.5kb upstream 0.5kb upstream 6586 true Chr5: 7191739-7198324 Arabidopsis thaliana
AT5G21150 0.5kb upstream 0.5kb upstream 500 false Chr5: 7191739-7192238 Arabidopsis thaliana
AT5G21150 0.5kb downstream 0.5kb downstream 6586 true Chr5: 7192239-7198824 Arabidopsis thaliana
AT5G21150 0.5kb downstream 0.5kb downstream 500 false Chr5: 7198325-7198824 Arabidopsis thaliana
AT5G21150 1.0kb upstream 1.0kb upstream 7086 true Chr5: 7191239-7198324 Arabidopsis thaliana
AT5G21150 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7191239-7192238 Arabidopsis thaliana
AT5G21150 1.0kb downstream 1.0kb downstream 7086 true Chr5: 7192239-7199324 Arabidopsis thaliana
AT5G21150 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7198325-7199324 Arabidopsis thaliana
AT5G21150 2.0kb upstream 2.0kb upstream 8086 true Chr5: 7190239-7198324 Arabidopsis thaliana
AT5G21150 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7190239-7192238 Arabidopsis thaliana
AT5G21150 2.0kb downstream 2.0kb downstream 8086 true Chr5: 7192239-7200324 Arabidopsis thaliana
AT5G21150 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7198325-7200324 Arabidopsis thaliana
AT5G21150 5.0kb upstream 5.0kb upstream 11086 true Chr5: 7187239-7198324 Arabidopsis thaliana
AT5G21150 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7187239-7192238 Arabidopsis thaliana
AT5G21150 5.0kb downstream 5.0kb downstream 11086 true Chr5: 7192239-7203324 Arabidopsis thaliana
AT5G21150 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7198325-7203324 Arabidopsis thaliana
AT5G21150 10.0kb upstream 10.0kb upstream 16086 true Chr5: 7182239-7198324 Arabidopsis thaliana
AT5G21150 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7182239-7192238 Arabidopsis thaliana
AT5G21150 10.0kb downstream 10.0kb downstream 16086 true Chr5: 7192239-7208324 Arabidopsis thaliana
AT5G21150 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7198325-7208324 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361616 5261 Brassicaceae View MSA
123798212 5264 Brassicales-Malvales View MSA
124295882 5266 SBM View MSA
124148197 5268 Malvidae View MSA
123874244 5270 Rosid View MSA
123458247 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104     Low  
cufflinks 0.122     Low  
cufflinks 0.031     Low Low
cufflinks 0.08     Low  
cufflinks 0.089     Low  
cufflinks 0.147     Low  

0 Strain