Gene : AT5G20970 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11527:SF156 - HEAT SHOCK FAMILY PROTEIN Genomic Order:  2030
Name:  ? AT5G20970 Secondary Identifier:  ? PAC:19669256
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20970 0.5kb upstream 0.5kb upstream 1702 true Chr5: 7122300-7124001 Arabidopsis thaliana
AT5G20970 0.5kb upstream 0.5kb upstream 500 false Chr5: 7122300-7122799 Arabidopsis thaliana
AT5G20970 0.5kb downstream 0.5kb downstream 1702 true Chr5: 7122800-7124501 Arabidopsis thaliana
AT5G20970 0.5kb downstream 0.5kb downstream 500 false Chr5: 7124002-7124501 Arabidopsis thaliana
AT5G20970 1.0kb upstream 1.0kb upstream 2202 true Chr5: 7121800-7124001 Arabidopsis thaliana
AT5G20970 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7121800-7122799 Arabidopsis thaliana
AT5G20970 1.0kb downstream 1.0kb downstream 2202 true Chr5: 7122800-7125001 Arabidopsis thaliana
AT5G20970 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7124002-7125001 Arabidopsis thaliana
AT5G20970 2.0kb upstream 2.0kb upstream 3202 true Chr5: 7120800-7124001 Arabidopsis thaliana
AT5G20970 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7120800-7122799 Arabidopsis thaliana
AT5G20970 2.0kb downstream 2.0kb downstream 3202 true Chr5: 7122800-7126001 Arabidopsis thaliana
AT5G20970 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7124002-7126001 Arabidopsis thaliana
AT5G20970 5.0kb upstream 5.0kb upstream 6202 true Chr5: 7117800-7124001 Arabidopsis thaliana
AT5G20970 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7117800-7122799 Arabidopsis thaliana
AT5G20970 5.0kb downstream 5.0kb downstream 6202 true Chr5: 7122800-7129001 Arabidopsis thaliana
AT5G20970 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7124002-7129001 Arabidopsis thaliana
AT5G20970 10.0kb upstream 10.0kb upstream 11202 true Chr5: 7112800-7124001 Arabidopsis thaliana
AT5G20970 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7112800-7122799 Arabidopsis thaliana
AT5G20970 10.0kb downstream 10.0kb downstream 11202 true Chr5: 7122800-7134001 Arabidopsis thaliana
AT5G20970 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7124002-7134001 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377168 5261 Brassicaceae View MSA
123835104 5264 Brassicales-Malvales View MSA
124349586 5266 SBM View MSA
124247177 5268 Malvidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.316        
cufflinks 28.32        
cufflinks 3.048        
cufflinks 22.855        
cufflinks 1.903       Low
cufflinks 27.667        

0 Strain