Gene : AIP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G20910 Defline:  (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2)
Genomic Order:  2023 Name:  ? AT5G20910
Secondary Identifier:  ? PAC:19669661
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G20910 0.5kb upstream 0.5kb upstream 2435 true Chr5: 7092512-7094946 Arabidopsis thaliana
AT5G20910 0.5kb upstream 0.5kb upstream 500 false Chr5: 7094447-7094946 Arabidopsis thaliana
AT5G20910 0.5kb downstream 0.5kb downstream 2435 true Chr5: 7092012-7094446 Arabidopsis thaliana
AT5G20910 0.5kb downstream 0.5kb downstream 500 false Chr5: 7092012-7092511 Arabidopsis thaliana
AT5G20910 1.0kb upstream 1.0kb upstream 2935 true Chr5: 7092512-7095446 Arabidopsis thaliana
AT5G20910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7094447-7095446 Arabidopsis thaliana
AT5G20910 1.0kb downstream 1.0kb downstream 2935 true Chr5: 7091512-7094446 Arabidopsis thaliana
AT5G20910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7091512-7092511 Arabidopsis thaliana
AT5G20910 2.0kb upstream 2.0kb upstream 3935 true Chr5: 7092512-7096446 Arabidopsis thaliana
AT5G20910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7094447-7096446 Arabidopsis thaliana
AT5G20910 2.0kb downstream 2.0kb downstream 3935 true Chr5: 7090512-7094446 Arabidopsis thaliana
AT5G20910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7090512-7092511 Arabidopsis thaliana
AT5G20910 5.0kb upstream 5.0kb upstream 6935 true Chr5: 7092512-7099446 Arabidopsis thaliana
AT5G20910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7094447-7099446 Arabidopsis thaliana
AT5G20910 5.0kb downstream 5.0kb downstream 6935 true Chr5: 7087512-7094446 Arabidopsis thaliana
AT5G20910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7087512-7092511 Arabidopsis thaliana
AT5G20910 10.0kb upstream 10.0kb upstream 11935 true Chr5: 7092512-7104446 Arabidopsis thaliana
AT5G20910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7094447-7104446 Arabidopsis thaliana
AT5G20910 10.0kb downstream 10.0kb downstream 11935 true Chr5: 7082512-7094446 Arabidopsis thaliana
AT5G20910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7082512-7092511 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
122369760 5261 Brassicaceae View MSA
123834702 5264 Brassicales-Malvales View MSA
124342804 5266 SBM View MSA
124243056 5268 Malvidae View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.945        
cufflinks 8.137        
cufflinks 6.274       Low
cufflinks 9.375        
cufflinks 9.576        
cufflinks 9.879        

0 Strain