Gene : AT5G24430 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24349//PTHR24349:SF90 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  2332
Name:  ? AT5G24430 Secondary Identifier:  ? PAC:19667403
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G24430 0.5kb upstream 0.5kb upstream 4459 true Chr5: 8339144-8343602 Arabidopsis thaliana
AT5G24430 0.5kb upstream 0.5kb upstream 500 false Chr5: 8343103-8343602 Arabidopsis thaliana
AT5G24430 0.5kb downstream 0.5kb downstream 4459 true Chr5: 8338644-8343102 Arabidopsis thaliana
AT5G24430 0.5kb downstream 0.5kb downstream 500 false Chr5: 8338644-8339143 Arabidopsis thaliana
AT5G24430 1.0kb upstream 1.0kb upstream 4959 true Chr5: 8339144-8344102 Arabidopsis thaliana
AT5G24430 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8343103-8344102 Arabidopsis thaliana
AT5G24430 1.0kb downstream 1.0kb downstream 4959 true Chr5: 8338144-8343102 Arabidopsis thaliana
AT5G24430 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8338144-8339143 Arabidopsis thaliana
AT5G24430 2.0kb upstream 2.0kb upstream 5959 true Chr5: 8339144-8345102 Arabidopsis thaliana
AT5G24430 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8343103-8345102 Arabidopsis thaliana
AT5G24430 2.0kb downstream 2.0kb downstream 5959 true Chr5: 8337144-8343102 Arabidopsis thaliana
AT5G24430 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8337144-8339143 Arabidopsis thaliana
AT5G24430 5.0kb upstream 5.0kb upstream 8959 true Chr5: 8339144-8348102 Arabidopsis thaliana
AT5G24430 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8343103-8348102 Arabidopsis thaliana
AT5G24430 5.0kb downstream 5.0kb downstream 8959 true Chr5: 8334144-8343102 Arabidopsis thaliana
AT5G24430 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8334144-8339143 Arabidopsis thaliana
AT5G24430 10.0kb upstream 10.0kb upstream 13959 true Chr5: 8339144-8353102 Arabidopsis thaliana
AT5G24430 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8343103-8353102 Arabidopsis thaliana
AT5G24430 10.0kb downstream 10.0kb downstream 13959 true Chr5: 8329144-8343102 Arabidopsis thaliana
AT5G24430 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8329144-8339143 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363781 5261 Brassicaceae View MSA
123828326 5264 Brassicales-Malvales View MSA
124349712 5266 SBM View MSA
124239826 5268 Malvidae View MSA
124071018 5270 Rosid View MSA
123749473 5271 Pentapetalae View MSA
122789222 5272 Eudicot View MSA
122047045 5273 Angiosperm View MSA
121343860 5274 Embryophyte View MSA
123379933 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.237        
cufflinks 23.215       High
cufflinks 4.801       Low
cufflinks 15.292        
cufflinks 5.758        
cufflinks 19.097        

0 Strain