Gene : AT5G24510 A. thaliana TAIR10
Defline:  (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  2340
Name:  ? AT5G24510 Secondary Identifier:  ? PAC:19672524
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G24510 0.5kb upstream 0.5kb upstream 1196 true Chr5: 8369171-8370366 Arabidopsis thaliana
AT5G24510 0.5kb upstream 0.5kb upstream 500 false Chr5: 8369867-8370366 Arabidopsis thaliana
AT5G24510 0.5kb downstream 0.5kb downstream 1196 true Chr5: 8368671-8369866 Arabidopsis thaliana
AT5G24510 0.5kb downstream 0.5kb downstream 500 false Chr5: 8368671-8369170 Arabidopsis thaliana
AT5G24510 1.0kb upstream 1.0kb upstream 1696 true Chr5: 8369171-8370866 Arabidopsis thaliana
AT5G24510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8369867-8370866 Arabidopsis thaliana
AT5G24510 1.0kb downstream 1.0kb downstream 1696 true Chr5: 8368171-8369866 Arabidopsis thaliana
AT5G24510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8368171-8369170 Arabidopsis thaliana
AT5G24510 2.0kb upstream 2.0kb upstream 2696 true Chr5: 8369171-8371866 Arabidopsis thaliana
AT5G24510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8369867-8371866 Arabidopsis thaliana
AT5G24510 2.0kb downstream 2.0kb downstream 2696 true Chr5: 8367171-8369866 Arabidopsis thaliana
AT5G24510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8367171-8369170 Arabidopsis thaliana
AT5G24510 5.0kb upstream 5.0kb upstream 5696 true Chr5: 8369171-8374866 Arabidopsis thaliana
AT5G24510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8369867-8374866 Arabidopsis thaliana
AT5G24510 5.0kb downstream 5.0kb downstream 5696 true Chr5: 8364171-8369866 Arabidopsis thaliana
AT5G24510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8364171-8369170 Arabidopsis thaliana
AT5G24510 10.0kb upstream 10.0kb upstream 10696 true Chr5: 8369171-8379866 Arabidopsis thaliana
AT5G24510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8369867-8379866 Arabidopsis thaliana
AT5G24510 10.0kb downstream 10.0kb downstream 10696 true Chr5: 8359171-8369866 Arabidopsis thaliana
AT5G24510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8359171-8369170 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376707 5261 Brassicaceae View MSA
123840228 5264 Brassicales-Malvales View MSA
124346847 5266 SBM View MSA
124250249 5268 Malvidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.453        
cufflinks 1.982        
cufflinks 0.486        
cufflinks 2.431       High
cufflinks 0.458        
cufflinks 2.258        

0 Strain