Gene : AT5G23730 A. thaliana TAIR10
Defline:  (1 of 1) KOG0265//KOG0279//KOG0316 - U5 snRNP-specific protein-like factor and related proteins // G protein beta subunit-like protein // Conserved WD40 repeat-containing protein Genomic Order:  2250
Name:  ? AT5G23730 Secondary Identifier:  ? PAC:19668395
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23730 0.5kb upstream 0.5kb upstream 1897 true Chr5: 8004734-8006630 Arabidopsis thaliana
AT5G23730 0.5kb upstream 0.5kb upstream 500 false Chr5: 8004734-8005233 Arabidopsis thaliana
AT5G23730 0.5kb downstream 0.5kb downstream 1897 true Chr5: 8005234-8007130 Arabidopsis thaliana
AT5G23730 0.5kb downstream 0.5kb downstream 500 false Chr5: 8006631-8007130 Arabidopsis thaliana
AT5G23730 1.0kb upstream 1.0kb upstream 2397 true Chr5: 8004234-8006630 Arabidopsis thaliana
AT5G23730 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8004234-8005233 Arabidopsis thaliana
AT5G23730 1.0kb downstream 1.0kb downstream 2397 true Chr5: 8005234-8007630 Arabidopsis thaliana
AT5G23730 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8006631-8007630 Arabidopsis thaliana
AT5G23730 2.0kb upstream 2.0kb upstream 3397 true Chr5: 8003234-8006630 Arabidopsis thaliana
AT5G23730 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8003234-8005233 Arabidopsis thaliana
AT5G23730 2.0kb downstream 2.0kb downstream 3397 true Chr5: 8005234-8008630 Arabidopsis thaliana
AT5G23730 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8006631-8008630 Arabidopsis thaliana
AT5G23730 5.0kb upstream 5.0kb upstream 6397 true Chr5: 8000234-8006630 Arabidopsis thaliana
AT5G23730 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8000234-8005233 Arabidopsis thaliana
AT5G23730 5.0kb downstream 5.0kb downstream 6397 true Chr5: 8005234-8011630 Arabidopsis thaliana
AT5G23730 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8006631-8011630 Arabidopsis thaliana
AT5G23730 10.0kb upstream 10.0kb upstream 11397 true Chr5: 7995234-8006630 Arabidopsis thaliana
AT5G23730 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7995234-8005233 Arabidopsis thaliana
AT5G23730 10.0kb downstream 10.0kb downstream 11397 true Chr5: 8005234-8016630 Arabidopsis thaliana
AT5G23730 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8006631-8016630 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377292 5261 Brassicaceae View MSA
123837703 5264 Brassicales-Malvales View MSA
124342825 5266 SBM View MSA
124249786 5268 Malvidae View MSA
124051447 5270 Rosid View MSA
123749693 5271 Pentapetalae View MSA
122793878 5272 Eudicot View MSA
122043681 5273 Angiosperm View MSA
121350599 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.435        
cufflinks 1.361        
cufflinks 1.879        
cufflinks 1.25        
cufflinks 2.222       High
cufflinks 1.392        

0 Strain