Sequence Feature Displayer
Ontology Annotation Displayer
1 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-5337 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT5G23790 0.5kb upstream | 0.5kb | upstream | 1994 | true | Chr5: 8020104-8022097 | Arabidopsis thaliana |
AT5G23790 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr5: 8021598-8022097 | Arabidopsis thaliana |
AT5G23790 0.5kb downstream | 0.5kb | downstream | 1994 | true | Chr5: 8019604-8021597 | Arabidopsis thaliana |
AT5G23790 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr5: 8019604-8020103 | Arabidopsis thaliana |
AT5G23790 1.0kb upstream | 1.0kb | upstream | 2494 | true | Chr5: 8020104-8022597 | Arabidopsis thaliana |
AT5G23790 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr5: 8021598-8022597 | Arabidopsis thaliana |
AT5G23790 1.0kb downstream | 1.0kb | downstream | 2494 | true | Chr5: 8019104-8021597 | Arabidopsis thaliana |
AT5G23790 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr5: 8019104-8020103 | Arabidopsis thaliana |
AT5G23790 2.0kb upstream | 2.0kb | upstream | 3494 | true | Chr5: 8020104-8023597 | Arabidopsis thaliana |
AT5G23790 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr5: 8021598-8023597 | Arabidopsis thaliana |
AT5G23790 2.0kb downstream | 2.0kb | downstream | 3494 | true | Chr5: 8018104-8021597 | Arabidopsis thaliana |
AT5G23790 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr5: 8018104-8020103 | Arabidopsis thaliana |
AT5G23790 5.0kb upstream | 5.0kb | upstream | 6494 | true | Chr5: 8020104-8026597 | Arabidopsis thaliana |
AT5G23790 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr5: 8021598-8026597 | Arabidopsis thaliana |
AT5G23790 5.0kb downstream | 5.0kb | downstream | 6494 | true | Chr5: 8015104-8021597 | Arabidopsis thaliana |
AT5G23790 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr5: 8015104-8020103 | Arabidopsis thaliana |
AT5G23790 10.0kb upstream | 10.0kb | upstream | 11494 | true | Chr5: 8020104-8031597 | Arabidopsis thaliana |
AT5G23790 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr5: 8021598-8031597 | Arabidopsis thaliana |
AT5G23790 10.0kb downstream | 10.0kb | downstream | 11494 | true | Chr5: 8010104-8021597 | Arabidopsis thaliana |
AT5G23790 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr5: 8010104-8020103 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122376753 | 5261 | Brassicaceae | View MSA |
123842385 | 5264 | Brassicales-Malvales | View MSA |
124323451 | 5266 | SBM | View MSA |
124256963 | 5268 | Malvidae | View MSA |
124072040 | 5270 | Rosid | View MSA |
123746069 | 5271 | Pentapetalae | View MSA |
122793646 | 5272 | Eudicot | View MSA |
122046900 | 5273 | Angiosperm | View MSA |
121310671 | 5274 | Embryophyte | View MSA |
123348097 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.02 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.043 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.111 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |