Gene : AT5G23820 A. thaliana TAIR10
Defline:  (1 of 9) PF02221 - ML domain (E1_DerP2_DerF2) Genomic Order:  2259
Name:  ? AT5G23820 Secondary Identifier:  ? PAC:19670380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23820 0.5kb upstream 0.5kb upstream 2253 true Chr5: 8030768-8033020 Arabidopsis thaliana
AT5G23820 0.5kb upstream 0.5kb upstream 500 false Chr5: 8030768-8031267 Arabidopsis thaliana
AT5G23820 0.5kb downstream 0.5kb downstream 2253 true Chr5: 8031268-8033520 Arabidopsis thaliana
AT5G23820 0.5kb downstream 0.5kb downstream 500 false Chr5: 8033021-8033520 Arabidopsis thaliana
AT5G23820 1.0kb upstream 1.0kb upstream 2753 true Chr5: 8030268-8033020 Arabidopsis thaliana
AT5G23820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8030268-8031267 Arabidopsis thaliana
AT5G23820 1.0kb downstream 1.0kb downstream 2753 true Chr5: 8031268-8034020 Arabidopsis thaliana
AT5G23820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8033021-8034020 Arabidopsis thaliana
AT5G23820 2.0kb upstream 2.0kb upstream 3753 true Chr5: 8029268-8033020 Arabidopsis thaliana
AT5G23820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8029268-8031267 Arabidopsis thaliana
AT5G23820 2.0kb downstream 2.0kb downstream 3753 true Chr5: 8031268-8035020 Arabidopsis thaliana
AT5G23820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8033021-8035020 Arabidopsis thaliana
AT5G23820 5.0kb upstream 5.0kb upstream 6753 true Chr5: 8026268-8033020 Arabidopsis thaliana
AT5G23820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8026268-8031267 Arabidopsis thaliana
AT5G23820 5.0kb downstream 5.0kb downstream 6753 true Chr5: 8031268-8038020 Arabidopsis thaliana
AT5G23820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8033021-8038020 Arabidopsis thaliana
AT5G23820 10.0kb upstream 10.0kb upstream 11753 true Chr5: 8021268-8033020 Arabidopsis thaliana
AT5G23820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8021268-8031267 Arabidopsis thaliana
AT5G23820 10.0kb downstream 10.0kb downstream 11753 true Chr5: 8031268-8043020 Arabidopsis thaliana
AT5G23820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8033021-8043020 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512057 5273 Angiosperm View MSA
122380217 5261 Brassicaceae View MSA
123802604 5264 Brassicales-Malvales View MSA
124299786 5266 SBM View MSA
124151110 5268 Malvidae View MSA
123876616 5270 Rosid View MSA
123460270 5271 Pentapetalae View MSA
122495647 5272 Eudicot View MSA
120785083 5274 Embryophyte View MSA
122826956 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.582       Low
cufflinks 43.998     High  
cufflinks 28.687     High  
cufflinks 61.83     High High
cufflinks 22.051        
cufflinks 58.718     High High

0 Strain