Gene : AT5G23710 A. thaliana TAIR10
Defline:  (1 of 1) K03025 - DNA-directed RNA polymerase III subunit RPC6 (RPC6, POLR3F) Genomic Order:  2248
Name:  ? AT5G23710 Secondary Identifier:  ? PAC:19666803
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23710 0.5kb upstream 0.5kb upstream 1524 true Chr5: 7996456-7997979 Arabidopsis thaliana
AT5G23710 0.5kb upstream 0.5kb upstream 500 false Chr5: 7997480-7997979 Arabidopsis thaliana
AT5G23710 0.5kb downstream 0.5kb downstream 1524 true Chr5: 7995956-7997479 Arabidopsis thaliana
AT5G23710 0.5kb downstream 0.5kb downstream 500 false Chr5: 7995956-7996455 Arabidopsis thaliana
AT5G23710 1.0kb upstream 1.0kb upstream 2024 true Chr5: 7996456-7998479 Arabidopsis thaliana
AT5G23710 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7997480-7998479 Arabidopsis thaliana
AT5G23710 1.0kb downstream 1.0kb downstream 2024 true Chr5: 7995456-7997479 Arabidopsis thaliana
AT5G23710 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7995456-7996455 Arabidopsis thaliana
AT5G23710 2.0kb upstream 2.0kb upstream 3024 true Chr5: 7996456-7999479 Arabidopsis thaliana
AT5G23710 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7997480-7999479 Arabidopsis thaliana
AT5G23710 2.0kb downstream 2.0kb downstream 3024 true Chr5: 7994456-7997479 Arabidopsis thaliana
AT5G23710 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7994456-7996455 Arabidopsis thaliana
AT5G23710 5.0kb upstream 5.0kb upstream 6024 true Chr5: 7996456-8002479 Arabidopsis thaliana
AT5G23710 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7997480-8002479 Arabidopsis thaliana
AT5G23710 5.0kb downstream 5.0kb downstream 6024 true Chr5: 7991456-7997479 Arabidopsis thaliana
AT5G23710 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7991456-7996455 Arabidopsis thaliana
AT5G23710 10.0kb upstream 10.0kb upstream 11024 true Chr5: 7996456-8007479 Arabidopsis thaliana
AT5G23710 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7997480-8007479 Arabidopsis thaliana
AT5G23710 10.0kb downstream 10.0kb downstream 11024 true Chr5: 7986456-7997479 Arabidopsis thaliana
AT5G23710 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7986456-7996455 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363016 5261 Brassicaceae View MSA
123833239 5264 Brassicales-Malvales View MSA
124340164 5266 SBM View MSA
124245053 5268 Malvidae View MSA
124066352 5270 Rosid View MSA
123744384 5271 Pentapetalae View MSA
122788690 5272 Eudicot View MSA
122046766 5273 Angiosperm View MSA
121344415 5274 Embryophyte View MSA
123425900 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.691        
cufflinks 13.268        
cufflinks 8.374       Low
cufflinks 15.084       High
cufflinks 9.196        
cufflinks 14.36        

0 Strain