Gene : FTRA1 A. thaliana TAIR10
Primary Identifier:  ? AT5G23440 Defline:  (1 of 3) 1.8.7.2 - Ferredoxin:thioredoxin reductase
Genomic Order:  2222 Name:  ? AT5G23440
Secondary Identifier:  ? PAC:19671343
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23440 0.5kb upstream 0.5kb upstream 1301 true Chr5: 7903045-7904345 Arabidopsis thaliana
AT5G23440 0.5kb upstream 0.5kb upstream 500 false Chr5: 7903846-7904345 Arabidopsis thaliana
AT5G23440 0.5kb downstream 0.5kb downstream 1301 true Chr5: 7902545-7903845 Arabidopsis thaliana
AT5G23440 0.5kb downstream 0.5kb downstream 500 false Chr5: 7902545-7903044 Arabidopsis thaliana
AT5G23440 1.0kb upstream 1.0kb upstream 1801 true Chr5: 7903045-7904845 Arabidopsis thaliana
AT5G23440 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7903846-7904845 Arabidopsis thaliana
AT5G23440 1.0kb downstream 1.0kb downstream 1801 true Chr5: 7902045-7903845 Arabidopsis thaliana
AT5G23440 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7902045-7903044 Arabidopsis thaliana
AT5G23440 2.0kb upstream 2.0kb upstream 2801 true Chr5: 7903045-7905845 Arabidopsis thaliana
AT5G23440 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7903846-7905845 Arabidopsis thaliana
AT5G23440 2.0kb downstream 2.0kb downstream 2801 true Chr5: 7901045-7903845 Arabidopsis thaliana
AT5G23440 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7901045-7903044 Arabidopsis thaliana
AT5G23440 5.0kb upstream 5.0kb upstream 5801 true Chr5: 7903045-7908845 Arabidopsis thaliana
AT5G23440 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7903846-7908845 Arabidopsis thaliana
AT5G23440 5.0kb downstream 5.0kb downstream 5801 true Chr5: 7898045-7903845 Arabidopsis thaliana
AT5G23440 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7898045-7903044 Arabidopsis thaliana
AT5G23440 10.0kb upstream 10.0kb upstream 10801 true Chr5: 7903045-7913845 Arabidopsis thaliana
AT5G23440 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7903846-7913845 Arabidopsis thaliana
AT5G23440 10.0kb downstream 10.0kb downstream 10801 true Chr5: 7893045-7903845 Arabidopsis thaliana
AT5G23440 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7893045-7903044 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377346 5261 Brassicaceae View MSA
123838430 5264 Brassicales-Malvales View MSA
124339118 5266 SBM View MSA
124244045 5268 Malvidae View MSA
124065891 5270 Rosid View MSA
123752187 5271 Pentapetalae View MSA
122792178 5272 Eudicot View MSA
122047173 5273 Angiosperm View MSA
121344137 5274 Embryophyte View MSA
123426101 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.156        
cufflinks 10.404        
cufflinks 32.352     High High
cufflinks 8.966       Low
cufflinks 27.817     High  
cufflinks 9.237        

0 Strain