Gene : LCBK1 A. thaliana TAIR10
Primary Identifier:  ? AT5G23450 Defline:  (1 of 1) PTHR12358:SF33 - ACYLGLYCEROL KINASE, MITOCHONDRIAL
Genomic Order:  2223 Name:  ? AT5G23450
Secondary Identifier:  ? PAC:19667824
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5129 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23450 0.5kb upstream 0.5kb upstream 5378 true Chr5: 7904708-7910085 Arabidopsis thaliana
AT5G23450 0.5kb upstream 0.5kb upstream 500 false Chr5: 7909586-7910085 Arabidopsis thaliana
AT5G23450 0.5kb downstream 0.5kb downstream 5378 true Chr5: 7904208-7909585 Arabidopsis thaliana
AT5G23450 0.5kb downstream 0.5kb downstream 500 false Chr5: 7904208-7904707 Arabidopsis thaliana
AT5G23450 1.0kb upstream 1.0kb upstream 5878 true Chr5: 7904708-7910585 Arabidopsis thaliana
AT5G23450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7909586-7910585 Arabidopsis thaliana
AT5G23450 1.0kb downstream 1.0kb downstream 5878 true Chr5: 7903708-7909585 Arabidopsis thaliana
AT5G23450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7903708-7904707 Arabidopsis thaliana
AT5G23450 2.0kb upstream 2.0kb upstream 6878 true Chr5: 7904708-7911585 Arabidopsis thaliana
AT5G23450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7909586-7911585 Arabidopsis thaliana
AT5G23450 2.0kb downstream 2.0kb downstream 6878 true Chr5: 7902708-7909585 Arabidopsis thaliana
AT5G23450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7902708-7904707 Arabidopsis thaliana
AT5G23450 5.0kb upstream 5.0kb upstream 9878 true Chr5: 7904708-7914585 Arabidopsis thaliana
AT5G23450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7909586-7914585 Arabidopsis thaliana
AT5G23450 5.0kb downstream 5.0kb downstream 9878 true Chr5: 7899708-7909585 Arabidopsis thaliana
AT5G23450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7899708-7904707 Arabidopsis thaliana
AT5G23450 10.0kb upstream 10.0kb upstream 14878 true Chr5: 7904708-7919585 Arabidopsis thaliana
AT5G23450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7909586-7919585 Arabidopsis thaliana
AT5G23450 10.0kb downstream 10.0kb downstream 14878 true Chr5: 7894708-7909585 Arabidopsis thaliana
AT5G23450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7894708-7904707 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363319 5261 Brassicaceae View MSA
123836450 5264 Brassicales-Malvales View MSA
124345813 5266 SBM View MSA
124254227 5268 Malvidae View MSA
124074924 5270 Rosid View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.879        
cufflinks 11.717        
cufflinks 7.474       Low
cufflinks 13.732       High
cufflinks 7.859        
cufflinks 11.063        

0 Strain