Gene : AT5G23510 A. thaliana TAIR10
Genomic Order:  2228 Name:  ? AT5G23510
Secondary Identifier:  ? PAC:19668036
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23510 0.5kb upstream 0.5kb upstream 2894 true Chr5: 7926445-7929338 Arabidopsis thaliana
AT5G23510 0.5kb upstream 0.5kb upstream 500 false Chr5: 7926445-7926944 Arabidopsis thaliana
AT5G23510 0.5kb downstream 0.5kb downstream 2894 true Chr5: 7926945-7929838 Arabidopsis thaliana
AT5G23510 0.5kb downstream 0.5kb downstream 500 false Chr5: 7929339-7929838 Arabidopsis thaliana
AT5G23510 1.0kb upstream 1.0kb upstream 3394 true Chr5: 7925945-7929338 Arabidopsis thaliana
AT5G23510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7925945-7926944 Arabidopsis thaliana
AT5G23510 1.0kb downstream 1.0kb downstream 3394 true Chr5: 7926945-7930338 Arabidopsis thaliana
AT5G23510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7929339-7930338 Arabidopsis thaliana
AT5G23510 2.0kb upstream 2.0kb upstream 4394 true Chr5: 7924945-7929338 Arabidopsis thaliana
AT5G23510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7924945-7926944 Arabidopsis thaliana
AT5G23510 2.0kb downstream 2.0kb downstream 4394 true Chr5: 7926945-7931338 Arabidopsis thaliana
AT5G23510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7929339-7931338 Arabidopsis thaliana
AT5G23510 5.0kb upstream 5.0kb upstream 7394 true Chr5: 7921945-7929338 Arabidopsis thaliana
AT5G23510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7921945-7926944 Arabidopsis thaliana
AT5G23510 5.0kb downstream 5.0kb downstream 7394 true Chr5: 7926945-7934338 Arabidopsis thaliana
AT5G23510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7929339-7934338 Arabidopsis thaliana
AT5G23510 10.0kb upstream 10.0kb upstream 12394 true Chr5: 7916945-7929338 Arabidopsis thaliana
AT5G23510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7916945-7926944 Arabidopsis thaliana
AT5G23510 10.0kb downstream 10.0kb downstream 12394 true Chr5: 7926945-7939338 Arabidopsis thaliana
AT5G23510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7929339-7939338 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331099 5261 Brassicaceae Singleton cluster - no MSA
123772305 5264 Brassicales-Malvales Singleton cluster - no MSA
124270824 5266 SBM Singleton cluster - no MSA
124126874 5268 Malvidae Singleton cluster - no MSA
124074724 5270 Rosid View MSA
123742844 5271 Pentapetalae View MSA
122770408 5272 Eudicot View MSA
122044281 5273 Angiosperm View MSA
121310265 5274 Embryophyte View MSA
123347803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.406       High
cufflinks 7.332        
cufflinks 5.45       Low
cufflinks 7.174        
cufflinks 5.474       Low
cufflinks 6.877        

0 Strain