Gene : AT5G23380 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31343//PTHR31343:SF3 - FAMILY NOT NAMED // GB|AAD11584.1 Genomic Order:  2214
Name:  ? AT5G23380 Secondary Identifier:  ? PAC:19667429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23380 0.5kb upstream 0.5kb upstream 4061 true Chr5: 7866242-7870302 Arabidopsis thaliana
AT5G23380 0.5kb upstream 0.5kb upstream 500 false Chr5: 7866242-7866741 Arabidopsis thaliana
AT5G23380 0.5kb downstream 0.5kb downstream 4061 true Chr5: 7866742-7870802 Arabidopsis thaliana
AT5G23380 0.5kb downstream 0.5kb downstream 500 false Chr5: 7870303-7870802 Arabidopsis thaliana
AT5G23380 1.0kb upstream 1.0kb upstream 4561 true Chr5: 7865742-7870302 Arabidopsis thaliana
AT5G23380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7865742-7866741 Arabidopsis thaliana
AT5G23380 1.0kb downstream 1.0kb downstream 4561 true Chr5: 7866742-7871302 Arabidopsis thaliana
AT5G23380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7870303-7871302 Arabidopsis thaliana
AT5G23380 2.0kb upstream 2.0kb upstream 5561 true Chr5: 7864742-7870302 Arabidopsis thaliana
AT5G23380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7864742-7866741 Arabidopsis thaliana
AT5G23380 2.0kb downstream 2.0kb downstream 5561 true Chr5: 7866742-7872302 Arabidopsis thaliana
AT5G23380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7870303-7872302 Arabidopsis thaliana
AT5G23380 5.0kb upstream 5.0kb upstream 8561 true Chr5: 7861742-7870302 Arabidopsis thaliana
AT5G23380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7861742-7866741 Arabidopsis thaliana
AT5G23380 5.0kb downstream 5.0kb downstream 8561 true Chr5: 7866742-7875302 Arabidopsis thaliana
AT5G23380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7870303-7875302 Arabidopsis thaliana
AT5G23380 10.0kb upstream 10.0kb upstream 13561 true Chr5: 7856742-7870302 Arabidopsis thaliana
AT5G23380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7856742-7866741 Arabidopsis thaliana
AT5G23380 10.0kb downstream 10.0kb downstream 13561 true Chr5: 7866742-7880302 Arabidopsis thaliana
AT5G23380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7870303-7880302 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781471 5273 Angiosperm View MSA
122380890 5261 Brassicaceae View MSA
123802953 5264 Brassicales-Malvales View MSA
124300100 5266 SBM View MSA
124151363 5268 Malvidae View MSA
124073914 5270 Rosid View MSA
123749714 5271 Pentapetalae View MSA
122773278 5272 Eudicot View MSA
121053046 5274 Embryophyte View MSA
123093076 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.522        
cufflinks 10.764       High
cufflinks 2.715        
cufflinks 8.814        
cufflinks 2.782        
cufflinks 6.71        

0 Strain