Gene : FSD3 A. thaliana TAIR10
Primary Identifier:  ? AT5G23310 Defline:  (1 of 1) PTHR11404//PTHR11404:SF17 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC
Genomic Order:  2207 Name:  ? AT5G23310
Secondary Identifier:  ? PAC:19672888
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana DETOX1-PWY Arabidopsis thaliana pathologic  
Athaliana DETOX1-PWY-1 Arabidopsis thaliana pathologic  
Athaliana PWY-6854 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23310 0.5kb upstream 0.5kb upstream 2510 true Chr5: 7850023-7852532 Arabidopsis thaliana
AT5G23310 0.5kb upstream 0.5kb upstream 500 false Chr5: 7850023-7850522 Arabidopsis thaliana
AT5G23310 0.5kb downstream 0.5kb downstream 2510 true Chr5: 7850523-7853032 Arabidopsis thaliana
AT5G23310 0.5kb downstream 0.5kb downstream 500 false Chr5: 7852533-7853032 Arabidopsis thaliana
AT5G23310 1.0kb upstream 1.0kb upstream 3010 true Chr5: 7849523-7852532 Arabidopsis thaliana
AT5G23310 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7849523-7850522 Arabidopsis thaliana
AT5G23310 1.0kb downstream 1.0kb downstream 3010 true Chr5: 7850523-7853532 Arabidopsis thaliana
AT5G23310 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7852533-7853532 Arabidopsis thaliana
AT5G23310 2.0kb upstream 2.0kb upstream 4010 true Chr5: 7848523-7852532 Arabidopsis thaliana
AT5G23310 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7848523-7850522 Arabidopsis thaliana
AT5G23310 2.0kb downstream 2.0kb downstream 4010 true Chr5: 7850523-7854532 Arabidopsis thaliana
AT5G23310 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7852533-7854532 Arabidopsis thaliana
AT5G23310 5.0kb upstream 5.0kb upstream 7010 true Chr5: 7845523-7852532 Arabidopsis thaliana
AT5G23310 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7845523-7850522 Arabidopsis thaliana
AT5G23310 5.0kb downstream 5.0kb downstream 7010 true Chr5: 7850523-7857532 Arabidopsis thaliana
AT5G23310 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7852533-7857532 Arabidopsis thaliana
AT5G23310 10.0kb upstream 10.0kb upstream 12010 true Chr5: 7840523-7852532 Arabidopsis thaliana
AT5G23310 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7840523-7850522 Arabidopsis thaliana
AT5G23310 10.0kb downstream 10.0kb downstream 12010 true Chr5: 7850523-7862532 Arabidopsis thaliana
AT5G23310 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7852533-7862532 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365770 5261 Brassicaceae View MSA
123828230 5264 Brassicales-Malvales View MSA
124345837 5266 SBM View MSA
124242563 5268 Malvidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.033       High
cufflinks 6.219        
cufflinks 21.576       High
cufflinks 6.121        
cufflinks 16.002        
cufflinks 5.291       Low

0 Strain