Gene : SCPL34 A. thaliana TAIR10
Primary Identifier:  ? AT5G23210 Defline:  (1 of 1) PTHR11802:SF31 - SERINE CARBOXYPEPTIDASE-LIKE 34
Genomic Order:  2196 Name:  ? AT5G23210
Secondary Identifier:  ? PAC:19668449
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23210 0.5kb upstream 0.5kb upstream 4857 true Chr5: 7810183-7815039 Arabidopsis thaliana
AT5G23210 0.5kb upstream 0.5kb upstream 500 false Chr5: 7810183-7810682 Arabidopsis thaliana
AT5G23210 0.5kb downstream 0.5kb downstream 4857 true Chr5: 7810683-7815539 Arabidopsis thaliana
AT5G23210 0.5kb downstream 0.5kb downstream 500 false Chr5: 7815040-7815539 Arabidopsis thaliana
AT5G23210 1.0kb upstream 1.0kb upstream 5357 true Chr5: 7809683-7815039 Arabidopsis thaliana
AT5G23210 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7809683-7810682 Arabidopsis thaliana
AT5G23210 1.0kb downstream 1.0kb downstream 5357 true Chr5: 7810683-7816039 Arabidopsis thaliana
AT5G23210 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7815040-7816039 Arabidopsis thaliana
AT5G23210 2.0kb upstream 2.0kb upstream 6357 true Chr5: 7808683-7815039 Arabidopsis thaliana
AT5G23210 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7808683-7810682 Arabidopsis thaliana
AT5G23210 2.0kb downstream 2.0kb downstream 6357 true Chr5: 7810683-7817039 Arabidopsis thaliana
AT5G23210 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7815040-7817039 Arabidopsis thaliana
AT5G23210 5.0kb upstream 5.0kb upstream 9357 true Chr5: 7805683-7815039 Arabidopsis thaliana
AT5G23210 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7805683-7810682 Arabidopsis thaliana
AT5G23210 5.0kb downstream 5.0kb downstream 9357 true Chr5: 7810683-7820039 Arabidopsis thaliana
AT5G23210 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7815040-7820039 Arabidopsis thaliana
AT5G23210 10.0kb upstream 10.0kb upstream 14357 true Chr5: 7800683-7815039 Arabidopsis thaliana
AT5G23210 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7800683-7810682 Arabidopsis thaliana
AT5G23210 10.0kb downstream 10.0kb downstream 14357 true Chr5: 7810683-7825039 Arabidopsis thaliana
AT5G23210 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7815040-7825039 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372273 5261 Brassicaceae View MSA
123827395 5264 Brassicales-Malvales View MSA
124345087 5266 SBM View MSA
124239727 5268 Malvidae View MSA
124064246 5270 Rosid View MSA
123744526 5271 Pentapetalae View MSA
122797546 5272 Eudicot View MSA
122047990 5273 Angiosperm View MSA
121310825 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.257        
cufflinks 0.294     Low Low
cufflinks 4.673        
cufflinks 0.432        
cufflinks 6.384       High
cufflinks 0.51        

0 Strain