Gene : TT16 A. thaliana TAIR10
Primary Identifier:  ? AT5G23260 Defline:  (1 of 1) PTHR11945:SF242 - PROTEIN TRANSPARENT TESTA 16
Genomic Order:  2202 Name:  ? AT5G23260
Secondary Identifier:  ? PAC:19667542
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23260 0.5kb upstream 0.5kb upstream 2910 true Chr5: 7835596-7838505 Arabidopsis thaliana
AT5G23260 0.5kb upstream 0.5kb upstream 500 false Chr5: 7835596-7836095 Arabidopsis thaliana
AT5G23260 0.5kb downstream 0.5kb downstream 2910 true Chr5: 7836096-7839005 Arabidopsis thaliana
AT5G23260 0.5kb downstream 0.5kb downstream 500 false Chr5: 7838506-7839005 Arabidopsis thaliana
AT5G23260 1.0kb upstream 1.0kb upstream 3410 true Chr5: 7835096-7838505 Arabidopsis thaliana
AT5G23260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7835096-7836095 Arabidopsis thaliana
AT5G23260 1.0kb downstream 1.0kb downstream 3410 true Chr5: 7836096-7839505 Arabidopsis thaliana
AT5G23260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7838506-7839505 Arabidopsis thaliana
AT5G23260 2.0kb upstream 2.0kb upstream 4410 true Chr5: 7834096-7838505 Arabidopsis thaliana
AT5G23260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7834096-7836095 Arabidopsis thaliana
AT5G23260 2.0kb downstream 2.0kb downstream 4410 true Chr5: 7836096-7840505 Arabidopsis thaliana
AT5G23260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7838506-7840505 Arabidopsis thaliana
AT5G23260 5.0kb upstream 5.0kb upstream 7410 true Chr5: 7831096-7838505 Arabidopsis thaliana
AT5G23260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7831096-7836095 Arabidopsis thaliana
AT5G23260 5.0kb downstream 5.0kb downstream 7410 true Chr5: 7836096-7843505 Arabidopsis thaliana
AT5G23260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7838506-7843505 Arabidopsis thaliana
AT5G23260 10.0kb upstream 10.0kb upstream 12410 true Chr5: 7826096-7838505 Arabidopsis thaliana
AT5G23260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7826096-7836095 Arabidopsis thaliana
AT5G23260 10.0kb downstream 10.0kb downstream 12410 true Chr5: 7836096-7848505 Arabidopsis thaliana
AT5G23260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7838506-7848505 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377405 5261 Brassicaceae View MSA
123834072 5264 Brassicales-Malvales View MSA
124340883 5266 SBM View MSA
124239237 5268 Malvidae View MSA
124062898 5270 Rosid View MSA
123748976 5271 Pentapetalae View MSA
122793472 5272 Eudicot View MSA
122046677 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain