Gene : PFD5 A. thaliana TAIR10
Primary Identifier:  ? AT5G23290 Defline:  (1 of 1) K04797 - prefoldin alpha subunit (pfdA, PFDN5)
Genomic Order:  2205 Name:  ? AT5G23290
Secondary Identifier:  ? PAC:19669520
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23290 0.5kb upstream 0.5kb upstream 2063 true Chr5: 7845581-7847643 Arabidopsis thaliana
AT5G23290 0.5kb upstream 0.5kb upstream 500 false Chr5: 7845581-7846080 Arabidopsis thaliana
AT5G23290 0.5kb downstream 0.5kb downstream 2063 true Chr5: 7846081-7848143 Arabidopsis thaliana
AT5G23290 0.5kb downstream 0.5kb downstream 500 false Chr5: 7847644-7848143 Arabidopsis thaliana
AT5G23290 1.0kb upstream 1.0kb upstream 2563 true Chr5: 7845081-7847643 Arabidopsis thaliana
AT5G23290 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7845081-7846080 Arabidopsis thaliana
AT5G23290 1.0kb downstream 1.0kb downstream 2563 true Chr5: 7846081-7848643 Arabidopsis thaliana
AT5G23290 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7847644-7848643 Arabidopsis thaliana
AT5G23290 2.0kb upstream 2.0kb upstream 3563 true Chr5: 7844081-7847643 Arabidopsis thaliana
AT5G23290 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7844081-7846080 Arabidopsis thaliana
AT5G23290 2.0kb downstream 2.0kb downstream 3563 true Chr5: 7846081-7849643 Arabidopsis thaliana
AT5G23290 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7847644-7849643 Arabidopsis thaliana
AT5G23290 5.0kb upstream 5.0kb upstream 6563 true Chr5: 7841081-7847643 Arabidopsis thaliana
AT5G23290 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7841081-7846080 Arabidopsis thaliana
AT5G23290 5.0kb downstream 5.0kb downstream 6563 true Chr5: 7846081-7852643 Arabidopsis thaliana
AT5G23290 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7847644-7852643 Arabidopsis thaliana
AT5G23290 10.0kb upstream 10.0kb upstream 11563 true Chr5: 7836081-7847643 Arabidopsis thaliana
AT5G23290 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7836081-7846080 Arabidopsis thaliana
AT5G23290 10.0kb downstream 10.0kb downstream 11563 true Chr5: 7846081-7857643 Arabidopsis thaliana
AT5G23290 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7847644-7857643 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363367 5261 Brassicaceae View MSA
123829511 5264 Brassicales-Malvales View MSA
124340550 5266 SBM View MSA
124244203 5268 Malvidae View MSA
124067703 5270 Rosid View MSA
123739799 5271 Pentapetalae View MSA
122788705 5272 Eudicot View MSA
122043184 5273 Angiosperm View MSA
121347228 5274 Embryophyte View MSA
123424270 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.608        
cufflinks 25.089        
cufflinks 11.733       Low
cufflinks 24.27        
cufflinks 12.806        
cufflinks 25.867        

0 Strain