Gene : NF-YB13 A. thaliana TAIR10
Primary Identifier:  ? AT5G23090 Defline:  (1 of 2) PTHR11064//PTHR11064:SF35 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // PROTEIN DR1 HOMOLOG
Genomic Order:  2184 Name:  ? AT5G23090
Secondary Identifier:  ? PAC:19665591
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23090 0.5kb upstream 0.5kb upstream 1975 true Chr5: 7748570-7750544 Arabidopsis thaliana
AT5G23090 0.5kb upstream 0.5kb upstream 500 false Chr5: 7748570-7749069 Arabidopsis thaliana
AT5G23090 0.5kb downstream 0.5kb downstream 1975 true Chr5: 7749070-7751044 Arabidopsis thaliana
AT5G23090 0.5kb downstream 0.5kb downstream 500 false Chr5: 7750545-7751044 Arabidopsis thaliana
AT5G23090 1.0kb upstream 1.0kb upstream 2475 true Chr5: 7748070-7750544 Arabidopsis thaliana
AT5G23090 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7748070-7749069 Arabidopsis thaliana
AT5G23090 1.0kb downstream 1.0kb downstream 2475 true Chr5: 7749070-7751544 Arabidopsis thaliana
AT5G23090 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7750545-7751544 Arabidopsis thaliana
AT5G23090 2.0kb upstream 2.0kb upstream 3475 true Chr5: 7747070-7750544 Arabidopsis thaliana
AT5G23090 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7747070-7749069 Arabidopsis thaliana
AT5G23090 2.0kb downstream 2.0kb downstream 3475 true Chr5: 7749070-7752544 Arabidopsis thaliana
AT5G23090 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7750545-7752544 Arabidopsis thaliana
AT5G23090 5.0kb upstream 5.0kb upstream 6475 true Chr5: 7744070-7750544 Arabidopsis thaliana
AT5G23090 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7744070-7749069 Arabidopsis thaliana
AT5G23090 5.0kb downstream 5.0kb downstream 6475 true Chr5: 7749070-7755544 Arabidopsis thaliana
AT5G23090 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7750545-7755544 Arabidopsis thaliana
AT5G23090 10.0kb upstream 10.0kb upstream 11475 true Chr5: 7739070-7750544 Arabidopsis thaliana
AT5G23090 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7739070-7749069 Arabidopsis thaliana
AT5G23090 10.0kb downstream 10.0kb downstream 11475 true Chr5: 7749070-7760544 Arabidopsis thaliana
AT5G23090 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7750545-7760544 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361050 5261 Brassicaceae View MSA
123839724 5264 Brassicales-Malvales View MSA
124337372 5266 SBM View MSA
124243742 5268 Malvidae View MSA
124066760 5270 Rosid View MSA
123746342 5271 Pentapetalae View MSA
122796163 5272 Eudicot View MSA
122043494 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121351075 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.282        
cufflinks 3.046       High
cufflinks 1.684       Low
cufflinks 2.987        
cufflinks 1.937        
cufflinks 2.643        

0 Strain