Gene : CaS A. thaliana TAIR10
Primary Identifier:  ? AT5G23060 Defline:  calcium sensing receptor
Genomic Order:  2181 Name:  ? AT5G23060
Secondary Identifier:  ? PAC:19673175
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G23060 0.5kb upstream 0.5kb upstream 2446 true Chr5: 7736590-7739035 Arabidopsis thaliana
AT5G23060 0.5kb upstream 0.5kb upstream 500 false Chr5: 7738536-7739035 Arabidopsis thaliana
AT5G23060 0.5kb downstream 0.5kb downstream 2446 true Chr5: 7736090-7738535 Arabidopsis thaliana
AT5G23060 0.5kb downstream 0.5kb downstream 500 false Chr5: 7736090-7736589 Arabidopsis thaliana
AT5G23060 1.0kb upstream 1.0kb upstream 2946 true Chr5: 7736590-7739535 Arabidopsis thaliana
AT5G23060 1.0kb upstream 1.0kb upstream 1000 false Chr5: 7738536-7739535 Arabidopsis thaliana
AT5G23060 1.0kb downstream 1.0kb downstream 2946 true Chr5: 7735590-7738535 Arabidopsis thaliana
AT5G23060 1.0kb downstream 1.0kb downstream 1000 false Chr5: 7735590-7736589 Arabidopsis thaliana
AT5G23060 2.0kb upstream 2.0kb upstream 3946 true Chr5: 7736590-7740535 Arabidopsis thaliana
AT5G23060 2.0kb upstream 2.0kb upstream 2000 false Chr5: 7738536-7740535 Arabidopsis thaliana
AT5G23060 2.0kb downstream 2.0kb downstream 3946 true Chr5: 7734590-7738535 Arabidopsis thaliana
AT5G23060 2.0kb downstream 2.0kb downstream 2000 false Chr5: 7734590-7736589 Arabidopsis thaliana
AT5G23060 5.0kb upstream 5.0kb upstream 6946 true Chr5: 7736590-7743535 Arabidopsis thaliana
AT5G23060 5.0kb upstream 5.0kb upstream 5000 false Chr5: 7738536-7743535 Arabidopsis thaliana
AT5G23060 5.0kb downstream 5.0kb downstream 6946 true Chr5: 7731590-7738535 Arabidopsis thaliana
AT5G23060 5.0kb downstream 5.0kb downstream 5000 false Chr5: 7731590-7736589 Arabidopsis thaliana
AT5G23060 10.0kb upstream 10.0kb upstream 11946 true Chr5: 7736590-7748535 Arabidopsis thaliana
AT5G23060 10.0kb upstream 10.0kb upstream 10000 false Chr5: 7738536-7748535 Arabidopsis thaliana
AT5G23060 10.0kb downstream 10.0kb downstream 11946 true Chr5: 7726590-7738535 Arabidopsis thaliana
AT5G23060 10.0kb downstream 10.0kb downstream 10000 false Chr5: 7726590-7736589 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041508 5273 Angiosperm View MSA
122369831 5261 Brassicaceae View MSA
123833923 5264 Brassicales-Malvales View MSA
124321905 5266 SBM View MSA
124237332 5268 Malvidae View MSA
124067334 5270 Rosid View MSA
123738970 5271 Pentapetalae View MSA
122793267 5272 Eudicot View MSA
121347966 5274 Embryophyte View MSA
123427649 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 138.066     High  
cufflinks 1.561        
cufflinks 167.149     High  
cufflinks 1.55        
cufflinks 140.937     High  
cufflinks 1.232        

0 Strain