Gene : HDA2 A. thaliana TAIR10
Primary Identifier:  ? AT5G26040 Defline:  (1 of 1) K11418 - histone deacetylase 11 (HDAC11)
Genomic Order:  2491 Name:  ? AT5G26040
Secondary Identifier:  ? PAC:19668829
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G26040 0.5kb upstream 0.5kb upstream 2980 true Chr5: 9099157-9102136 Arabidopsis thaliana
AT5G26040 0.5kb upstream 0.5kb upstream 500 false Chr5: 9101637-9102136 Arabidopsis thaliana
AT5G26040 0.5kb downstream 0.5kb downstream 2980 true Chr5: 9098657-9101636 Arabidopsis thaliana
AT5G26040 0.5kb downstream 0.5kb downstream 500 false Chr5: 9098657-9099156 Arabidopsis thaliana
AT5G26040 1.0kb upstream 1.0kb upstream 3480 true Chr5: 9099157-9102636 Arabidopsis thaliana
AT5G26040 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9101637-9102636 Arabidopsis thaliana
AT5G26040 1.0kb downstream 1.0kb downstream 3480 true Chr5: 9098157-9101636 Arabidopsis thaliana
AT5G26040 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9098157-9099156 Arabidopsis thaliana
AT5G26040 2.0kb upstream 2.0kb upstream 4480 true Chr5: 9099157-9103636 Arabidopsis thaliana
AT5G26040 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9101637-9103636 Arabidopsis thaliana
AT5G26040 2.0kb downstream 2.0kb downstream 4480 true Chr5: 9097157-9101636 Arabidopsis thaliana
AT5G26040 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9097157-9099156 Arabidopsis thaliana
AT5G26040 5.0kb upstream 5.0kb upstream 7480 true Chr5: 9099157-9106636 Arabidopsis thaliana
AT5G26040 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9101637-9106636 Arabidopsis thaliana
AT5G26040 5.0kb downstream 5.0kb downstream 7480 true Chr5: 9094157-9101636 Arabidopsis thaliana
AT5G26040 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9094157-9099156 Arabidopsis thaliana
AT5G26040 10.0kb upstream 10.0kb upstream 12480 true Chr5: 9099157-9111636 Arabidopsis thaliana
AT5G26040 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9101637-9111636 Arabidopsis thaliana
AT5G26040 10.0kb downstream 10.0kb downstream 12480 true Chr5: 9089157-9101636 Arabidopsis thaliana
AT5G26040 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9089157-9099156 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370164 5261 Brassicaceae View MSA
123831263 5264 Brassicales-Malvales View MSA
124336879 5266 SBM View MSA
124242055 5268 Malvidae View MSA
124064548 5270 Rosid View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.172        
cufflinks 2.48        
cufflinks 2.505        
cufflinks 2.789        
cufflinks 2.978       High
cufflinks 2.013       Low

0 Strain