Gene : AT5G25960 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31589:SF18 - T1N24.5 PROTEIN Genomic Order:  2484
Name:  ? AT5G25960 Secondary Identifier:  ? PAC:19667186
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25960 0.5kb upstream 0.5kb upstream 2595 true Chr5: 9062917-9065511 Arabidopsis thaliana
AT5G25960 0.5kb upstream 0.5kb upstream 500 false Chr5: 9065012-9065511 Arabidopsis thaliana
AT5G25960 0.5kb downstream 0.5kb downstream 2595 true Chr5: 9062417-9065011 Arabidopsis thaliana
AT5G25960 0.5kb downstream 0.5kb downstream 500 false Chr5: 9062417-9062916 Arabidopsis thaliana
AT5G25960 1.0kb upstream 1.0kb upstream 3095 true Chr5: 9062917-9066011 Arabidopsis thaliana
AT5G25960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9065012-9066011 Arabidopsis thaliana
AT5G25960 1.0kb downstream 1.0kb downstream 3095 true Chr5: 9061917-9065011 Arabidopsis thaliana
AT5G25960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9061917-9062916 Arabidopsis thaliana
AT5G25960 2.0kb upstream 2.0kb upstream 4095 true Chr5: 9062917-9067011 Arabidopsis thaliana
AT5G25960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9065012-9067011 Arabidopsis thaliana
AT5G25960 2.0kb downstream 2.0kb downstream 4095 true Chr5: 9060917-9065011 Arabidopsis thaliana
AT5G25960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9060917-9062916 Arabidopsis thaliana
AT5G25960 5.0kb upstream 5.0kb upstream 7095 true Chr5: 9062917-9070011 Arabidopsis thaliana
AT5G25960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9065012-9070011 Arabidopsis thaliana
AT5G25960 5.0kb downstream 5.0kb downstream 7095 true Chr5: 9057917-9065011 Arabidopsis thaliana
AT5G25960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9057917-9062916 Arabidopsis thaliana
AT5G25960 10.0kb upstream 10.0kb upstream 12095 true Chr5: 9062917-9075011 Arabidopsis thaliana
AT5G25960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9065012-9075011 Arabidopsis thaliana
AT5G25960 10.0kb downstream 10.0kb downstream 12095 true Chr5: 9052917-9065011 Arabidopsis thaliana
AT5G25960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9052917-9062916 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331033 5261 Brassicaceae Singleton cluster - no MSA
123772245 5264 Brassicales-Malvales Singleton cluster - no MSA
124270765 5266 SBM Singleton cluster - no MSA
124126815 5268 Malvidae Singleton cluster - no MSA
123855703 5270 Rosid Singleton cluster - no MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain