Gene : AT5G25820 A. thaliana TAIR10
Defline:  (1 of 3) PTHR11062//PTHR11062:SF108 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  2470
Name:  ? AT5G25820 Secondary Identifier:  ? PAC:19673090
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5980 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25820 0.5kb upstream 0.5kb upstream 3647 true Chr5: 8997183-9000829 Arabidopsis thaliana
AT5G25820 0.5kb upstream 0.5kb upstream 500 false Chr5: 9000330-9000829 Arabidopsis thaliana
AT5G25820 0.5kb downstream 0.5kb downstream 3647 true Chr5: 8996683-9000329 Arabidopsis thaliana
AT5G25820 0.5kb downstream 0.5kb downstream 500 false Chr5: 8996683-8997182 Arabidopsis thaliana
AT5G25820 1.0kb upstream 1.0kb upstream 4147 true Chr5: 8997183-9001329 Arabidopsis thaliana
AT5G25820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9000330-9001329 Arabidopsis thaliana
AT5G25820 1.0kb downstream 1.0kb downstream 4147 true Chr5: 8996183-9000329 Arabidopsis thaliana
AT5G25820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8996183-8997182 Arabidopsis thaliana
AT5G25820 2.0kb upstream 2.0kb upstream 5147 true Chr5: 8997183-9002329 Arabidopsis thaliana
AT5G25820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9000330-9002329 Arabidopsis thaliana
AT5G25820 2.0kb downstream 2.0kb downstream 5147 true Chr5: 8995183-9000329 Arabidopsis thaliana
AT5G25820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8995183-8997182 Arabidopsis thaliana
AT5G25820 5.0kb upstream 5.0kb upstream 8147 true Chr5: 8997183-9005329 Arabidopsis thaliana
AT5G25820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9000330-9005329 Arabidopsis thaliana
AT5G25820 5.0kb downstream 5.0kb downstream 8147 true Chr5: 8992183-9000329 Arabidopsis thaliana
AT5G25820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8992183-8997182 Arabidopsis thaliana
AT5G25820 10.0kb upstream 10.0kb upstream 13147 true Chr5: 8997183-9010329 Arabidopsis thaliana
AT5G25820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9000330-9010329 Arabidopsis thaliana
AT5G25820 10.0kb downstream 10.0kb downstream 13147 true Chr5: 8987183-9000329 Arabidopsis thaliana
AT5G25820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8987183-8997182 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122372180 5261 Brassicaceae View MSA
123830917 5264 Brassicales-Malvales View MSA
124349695 5266 SBM View MSA
124250724 5268 Malvidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.047        
cufflinks 2.542        
cufflinks 0.503       Low
cufflinks 3.948       High
cufflinks 0.865        
cufflinks 2.267        

0 Strain