Gene : GATA12 A. thaliana TAIR10
Primary Identifier:  ? AT5G25830 Defline:  (1 of 1) PTHR10071//PTHR10071:SF202 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 12
Genomic Order:  2471 Name:  ? AT5G25830
Secondary Identifier:  ? PAC:19670431
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25830 0.5kb upstream 0.5kb upstream 1690 true Chr5: 9004313-9006002 Arabidopsis thaliana
AT5G25830 0.5kb upstream 0.5kb upstream 500 false Chr5: 9005503-9006002 Arabidopsis thaliana
AT5G25830 0.5kb downstream 0.5kb downstream 1690 true Chr5: 9003813-9005502 Arabidopsis thaliana
AT5G25830 0.5kb downstream 0.5kb downstream 500 false Chr5: 9003813-9004312 Arabidopsis thaliana
AT5G25830 1.0kb upstream 1.0kb upstream 2190 true Chr5: 9004313-9006502 Arabidopsis thaliana
AT5G25830 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9005503-9006502 Arabidopsis thaliana
AT5G25830 1.0kb downstream 1.0kb downstream 2190 true Chr5: 9003313-9005502 Arabidopsis thaliana
AT5G25830 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9003313-9004312 Arabidopsis thaliana
AT5G25830 2.0kb upstream 2.0kb upstream 3190 true Chr5: 9004313-9007502 Arabidopsis thaliana
AT5G25830 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9005503-9007502 Arabidopsis thaliana
AT5G25830 2.0kb downstream 2.0kb downstream 3190 true Chr5: 9002313-9005502 Arabidopsis thaliana
AT5G25830 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9002313-9004312 Arabidopsis thaliana
AT5G25830 5.0kb upstream 5.0kb upstream 6190 true Chr5: 9004313-9010502 Arabidopsis thaliana
AT5G25830 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9005503-9010502 Arabidopsis thaliana
AT5G25830 5.0kb downstream 5.0kb downstream 6190 true Chr5: 8999313-9005502 Arabidopsis thaliana
AT5G25830 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8999313-9004312 Arabidopsis thaliana
AT5G25830 10.0kb upstream 10.0kb upstream 11190 true Chr5: 9004313-9015502 Arabidopsis thaliana
AT5G25830 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9005503-9015502 Arabidopsis thaliana
AT5G25830 10.0kb downstream 10.0kb downstream 11190 true Chr5: 8994313-9005502 Arabidopsis thaliana
AT5G25830 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8994313-9004312 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369330 5261 Brassicaceae View MSA
123835655 5264 Brassicales-Malvales View MSA
124344223 5266 SBM View MSA
124253623 5268 Malvidae View MSA
124070320 5270 Rosid View MSA
123751273 5271 Pentapetalae View MSA
122797583 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.519        
cufflinks 10.433        
cufflinks 1.384        
cufflinks 13.236       High
cufflinks 1.477        
cufflinks 10.302        

0 Strain