Gene : AT5G25600 A. thaliana TAIR10
Defline:  (1 of 14) PTHR31286:SF1 - NUCLEIC ACID BINDING / ZINC ION BINDING PROTEIN-RELATED Genomic Order:  2455
Name:  ? AT5G25600 Secondary Identifier:  ? PAC:19669459
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25600 0.5kb upstream 0.5kb upstream 1597 true Chr5: 8912959-8914555 Arabidopsis thaliana
AT5G25600 0.5kb upstream 0.5kb upstream 500 false Chr5: 8914056-8914555 Arabidopsis thaliana
AT5G25600 0.5kb downstream 0.5kb downstream 1597 true Chr5: 8912459-8914055 Arabidopsis thaliana
AT5G25600 0.5kb downstream 0.5kb downstream 500 false Chr5: 8912459-8912958 Arabidopsis thaliana
AT5G25600 1.0kb upstream 1.0kb upstream 2097 true Chr5: 8912959-8915055 Arabidopsis thaliana
AT5G25600 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8914056-8915055 Arabidopsis thaliana
AT5G25600 1.0kb downstream 1.0kb downstream 2097 true Chr5: 8911959-8914055 Arabidopsis thaliana
AT5G25600 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8911959-8912958 Arabidopsis thaliana
AT5G25600 2.0kb upstream 2.0kb upstream 3097 true Chr5: 8912959-8916055 Arabidopsis thaliana
AT5G25600 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8914056-8916055 Arabidopsis thaliana
AT5G25600 2.0kb downstream 2.0kb downstream 3097 true Chr5: 8910959-8914055 Arabidopsis thaliana
AT5G25600 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8910959-8912958 Arabidopsis thaliana
AT5G25600 5.0kb upstream 5.0kb upstream 6097 true Chr5: 8912959-8919055 Arabidopsis thaliana
AT5G25600 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8914056-8919055 Arabidopsis thaliana
AT5G25600 5.0kb downstream 5.0kb downstream 6097 true Chr5: 8907959-8914055 Arabidopsis thaliana
AT5G25600 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8907959-8912958 Arabidopsis thaliana
AT5G25600 10.0kb upstream 10.0kb upstream 11097 true Chr5: 8912959-8924055 Arabidopsis thaliana
AT5G25600 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8914056-8924055 Arabidopsis thaliana
AT5G25600 10.0kb downstream 10.0kb downstream 11097 true Chr5: 8902959-8914055 Arabidopsis thaliana
AT5G25600 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8902959-8912958 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379755 5261 Brassicaceae View MSA
123840396 5264 Brassicales-Malvales View MSA
124322713 5266 SBM View MSA
124254241 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain