Gene : AT5G25570 A. thaliana TAIR10
Genomic Order:  2452 Name:  ? AT5G25570
Secondary Identifier:  ? PAC:19668727
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25570 0.5kb upstream 0.5kb upstream 1979 true Chr5: 8901241-8903219 Arabidopsis thaliana
AT5G25570 0.5kb upstream 0.5kb upstream 500 false Chr5: 8901241-8901740 Arabidopsis thaliana
AT5G25570 0.5kb downstream 0.5kb downstream 1979 true Chr5: 8901741-8903719 Arabidopsis thaliana
AT5G25570 0.5kb downstream 0.5kb downstream 500 false Chr5: 8903220-8903719 Arabidopsis thaliana
AT5G25570 1.0kb upstream 1.0kb upstream 2479 true Chr5: 8900741-8903219 Arabidopsis thaliana
AT5G25570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8900741-8901740 Arabidopsis thaliana
AT5G25570 1.0kb downstream 1.0kb downstream 2479 true Chr5: 8901741-8904219 Arabidopsis thaliana
AT5G25570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8903220-8904219 Arabidopsis thaliana
AT5G25570 2.0kb upstream 2.0kb upstream 3479 true Chr5: 8899741-8903219 Arabidopsis thaliana
AT5G25570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8899741-8901740 Arabidopsis thaliana
AT5G25570 2.0kb downstream 2.0kb downstream 3479 true Chr5: 8901741-8905219 Arabidopsis thaliana
AT5G25570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8903220-8905219 Arabidopsis thaliana
AT5G25570 5.0kb upstream 5.0kb upstream 6479 true Chr5: 8896741-8903219 Arabidopsis thaliana
AT5G25570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8896741-8901740 Arabidopsis thaliana
AT5G25570 5.0kb downstream 5.0kb downstream 6479 true Chr5: 8901741-8908219 Arabidopsis thaliana
AT5G25570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8903220-8908219 Arabidopsis thaliana
AT5G25570 10.0kb upstream 10.0kb upstream 11479 true Chr5: 8891741-8903219 Arabidopsis thaliana
AT5G25570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8891741-8901740 Arabidopsis thaliana
AT5G25570 10.0kb downstream 10.0kb downstream 11479 true Chr5: 8901741-8913219 Arabidopsis thaliana
AT5G25570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8903220-8913219 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331148 5261 Brassicaceae Singleton cluster - no MSA
123772351 5264 Brassicales-Malvales Singleton cluster - no MSA
124270868 5266 SBM Singleton cluster - no MSA
124247857 5268 Malvidae View MSA
124063009 5270 Rosid View MSA
123740949 5271 Pentapetalae View MSA
122788449 5272 Eudicot View MSA
122044068 5273 Angiosperm View MSA
121310233 5274 Embryophyte View MSA
123347779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.588       Low
cufflinks 1.185       High
cufflinks 1.014        
cufflinks 1.082        
cufflinks 0.719        
cufflinks 0.738        

0 Strain