Gene : AT5G25510 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10257:SF25 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 57 KDA REGULATORY SUBUNIT B' IOTA ISOFORM Genomic Order:  2446
Name:  ? AT5G25510 Secondary Identifier:  ? PAC:19665365
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25510 0.5kb upstream 0.5kb upstream 2867 true Chr5: 8882468-8885334 Arabidopsis thaliana
AT5G25510 0.5kb upstream 0.5kb upstream 500 false Chr5: 8884835-8885334 Arabidopsis thaliana
AT5G25510 0.5kb downstream 0.5kb downstream 2867 true Chr5: 8881968-8884834 Arabidopsis thaliana
AT5G25510 0.5kb downstream 0.5kb downstream 500 false Chr5: 8881968-8882467 Arabidopsis thaliana
AT5G25510 1.0kb upstream 1.0kb upstream 3367 true Chr5: 8882468-8885834 Arabidopsis thaliana
AT5G25510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8884835-8885834 Arabidopsis thaliana
AT5G25510 1.0kb downstream 1.0kb downstream 3367 true Chr5: 8881468-8884834 Arabidopsis thaliana
AT5G25510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8881468-8882467 Arabidopsis thaliana
AT5G25510 2.0kb upstream 2.0kb upstream 4367 true Chr5: 8882468-8886834 Arabidopsis thaliana
AT5G25510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8884835-8886834 Arabidopsis thaliana
AT5G25510 2.0kb downstream 2.0kb downstream 4367 true Chr5: 8880468-8884834 Arabidopsis thaliana
AT5G25510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8880468-8882467 Arabidopsis thaliana
AT5G25510 5.0kb upstream 5.0kb upstream 7367 true Chr5: 8882468-8889834 Arabidopsis thaliana
AT5G25510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8884835-8889834 Arabidopsis thaliana
AT5G25510 5.0kb downstream 5.0kb downstream 7367 true Chr5: 8877468-8884834 Arabidopsis thaliana
AT5G25510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8877468-8882467 Arabidopsis thaliana
AT5G25510 10.0kb upstream 10.0kb upstream 12367 true Chr5: 8882468-8894834 Arabidopsis thaliana
AT5G25510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8884835-8894834 Arabidopsis thaliana
AT5G25510 10.0kb downstream 10.0kb downstream 12367 true Chr5: 8872468-8884834 Arabidopsis thaliana
AT5G25510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8872468-8882467 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026563 5273 Angiosperm View MSA
122364952 5261 Brassicaceae View MSA
123832760 5264 Brassicales-Malvales View MSA
124344182 5266 SBM View MSA
124238620 5268 Malvidae View MSA
124069819 5270 Rosid View MSA
123744621 5271 Pentapetalae View MSA
122789536 5272 Eudicot View MSA
121296391 5274 Embryophyte View MSA
123334563 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.599        
cufflinks 26.617        
cufflinks 18.27       Low
cufflinks 26.009        
cufflinks 17.986       Low
cufflinks 31.594     High High

0 Strain