Gene : DNMT2 A. thaliana TAIR10
Primary Identifier:  ? AT5G25480 Defline:  (1 of 1) 2.1.1.204 - tRNA (cytosine(38)-C(5))-methyltransferase
Genomic Order:  2443 Name:  ? AT5G25480
Secondary Identifier:  ? PAC:19665648
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25480 0.5kb upstream 0.5kb upstream 2890 true Chr5: 8869873-8872762 Arabidopsis thaliana
AT5G25480 0.5kb upstream 0.5kb upstream 500 false Chr5: 8872263-8872762 Arabidopsis thaliana
AT5G25480 0.5kb downstream 0.5kb downstream 2890 true Chr5: 8869373-8872262 Arabidopsis thaliana
AT5G25480 0.5kb downstream 0.5kb downstream 500 false Chr5: 8869373-8869872 Arabidopsis thaliana
AT5G25480 1.0kb upstream 1.0kb upstream 3390 true Chr5: 8869873-8873262 Arabidopsis thaliana
AT5G25480 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8872263-8873262 Arabidopsis thaliana
AT5G25480 1.0kb downstream 1.0kb downstream 3390 true Chr5: 8868873-8872262 Arabidopsis thaliana
AT5G25480 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8868873-8869872 Arabidopsis thaliana
AT5G25480 2.0kb upstream 2.0kb upstream 4390 true Chr5: 8869873-8874262 Arabidopsis thaliana
AT5G25480 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8872263-8874262 Arabidopsis thaliana
AT5G25480 2.0kb downstream 2.0kb downstream 4390 true Chr5: 8867873-8872262 Arabidopsis thaliana
AT5G25480 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8867873-8869872 Arabidopsis thaliana
AT5G25480 5.0kb upstream 5.0kb upstream 7390 true Chr5: 8869873-8877262 Arabidopsis thaliana
AT5G25480 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8872263-8877262 Arabidopsis thaliana
AT5G25480 5.0kb downstream 5.0kb downstream 7390 true Chr5: 8864873-8872262 Arabidopsis thaliana
AT5G25480 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8864873-8869872 Arabidopsis thaliana
AT5G25480 10.0kb upstream 10.0kb upstream 12390 true Chr5: 8869873-8882262 Arabidopsis thaliana
AT5G25480 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8872263-8882262 Arabidopsis thaliana
AT5G25480 10.0kb downstream 10.0kb downstream 12390 true Chr5: 8859873-8872262 Arabidopsis thaliana
AT5G25480 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8859873-8869872 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373730 5261 Brassicaceae View MSA
123836316 5264 Brassicales-Malvales View MSA
124343310 5266 SBM View MSA
124237015 5268 Malvidae View MSA
124060952 5270 Rosid View MSA
123740038 5271 Pentapetalae View MSA
122790174 5272 Eudicot View MSA
122042989 5273 Angiosperm View MSA
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.257        
cufflinks 3.387        
cufflinks 1.663       Low
cufflinks 3.682       High
cufflinks 1.766       Low
cufflinks 3.203        

0 Strain