Gene : AT5G25550 A. thaliana TAIR10
Defline:  (1 of 21) PF00560//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat (LRR_8) Genomic Order:  2450
Name:  ? AT5G25550 Secondary Identifier:  ? PAC:19665281
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25550 0.5kb upstream 0.5kb upstream 1802 true Chr5: 8893679-8895480 Arabidopsis thaliana
AT5G25550 0.5kb upstream 0.5kb upstream 500 false Chr5: 8893679-8894178 Arabidopsis thaliana
AT5G25550 0.5kb downstream 0.5kb downstream 1802 true Chr5: 8894179-8895980 Arabidopsis thaliana
AT5G25550 0.5kb downstream 0.5kb downstream 500 false Chr5: 8895481-8895980 Arabidopsis thaliana
AT5G25550 1.0kb upstream 1.0kb upstream 2302 true Chr5: 8893179-8895480 Arabidopsis thaliana
AT5G25550 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8893179-8894178 Arabidopsis thaliana
AT5G25550 1.0kb downstream 1.0kb downstream 2302 true Chr5: 8894179-8896480 Arabidopsis thaliana
AT5G25550 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8895481-8896480 Arabidopsis thaliana
AT5G25550 2.0kb upstream 2.0kb upstream 3302 true Chr5: 8892179-8895480 Arabidopsis thaliana
AT5G25550 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8892179-8894178 Arabidopsis thaliana
AT5G25550 2.0kb downstream 2.0kb downstream 3302 true Chr5: 8894179-8897480 Arabidopsis thaliana
AT5G25550 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8895481-8897480 Arabidopsis thaliana
AT5G25550 5.0kb upstream 5.0kb upstream 6302 true Chr5: 8889179-8895480 Arabidopsis thaliana
AT5G25550 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8889179-8894178 Arabidopsis thaliana
AT5G25550 5.0kb downstream 5.0kb downstream 6302 true Chr5: 8894179-8900480 Arabidopsis thaliana
AT5G25550 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8895481-8900480 Arabidopsis thaliana
AT5G25550 10.0kb upstream 10.0kb upstream 11302 true Chr5: 8884179-8895480 Arabidopsis thaliana
AT5G25550 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8884179-8894178 Arabidopsis thaliana
AT5G25550 10.0kb downstream 10.0kb downstream 11302 true Chr5: 8894179-8905480 Arabidopsis thaliana
AT5G25550 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8895481-8905480 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372303 5261 Brassicaceae View MSA
123800332 5264 Brassicales-Malvales View MSA
124350581 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  

0 Strain