Gene : AT5G25450 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12022 - UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN Genomic Order:  2439
Name:  ? AT5G25450 Secondary Identifier:  ? PAC:19672401
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25450 0.5kb upstream 0.5kb upstream 1980 true Chr5: 8856497-8858476 Arabidopsis thaliana
AT5G25450 0.5kb upstream 0.5kb upstream 500 false Chr5: 8856497-8856996 Arabidopsis thaliana
AT5G25450 0.5kb downstream 0.5kb downstream 1980 true Chr5: 8856997-8858976 Arabidopsis thaliana
AT5G25450 0.5kb downstream 0.5kb downstream 500 false Chr5: 8858477-8858976 Arabidopsis thaliana
AT5G25450 1.0kb upstream 1.0kb upstream 2480 true Chr5: 8855997-8858476 Arabidopsis thaliana
AT5G25450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8855997-8856996 Arabidopsis thaliana
AT5G25450 1.0kb downstream 1.0kb downstream 2480 true Chr5: 8856997-8859476 Arabidopsis thaliana
AT5G25450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8858477-8859476 Arabidopsis thaliana
AT5G25450 2.0kb upstream 2.0kb upstream 3480 true Chr5: 8854997-8858476 Arabidopsis thaliana
AT5G25450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8854997-8856996 Arabidopsis thaliana
AT5G25450 2.0kb downstream 2.0kb downstream 3480 true Chr5: 8856997-8860476 Arabidopsis thaliana
AT5G25450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8858477-8860476 Arabidopsis thaliana
AT5G25450 5.0kb upstream 5.0kb upstream 6480 true Chr5: 8851997-8858476 Arabidopsis thaliana
AT5G25450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8851997-8856996 Arabidopsis thaliana
AT5G25450 5.0kb downstream 5.0kb downstream 6480 true Chr5: 8856997-8863476 Arabidopsis thaliana
AT5G25450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8858477-8863476 Arabidopsis thaliana
AT5G25450 10.0kb upstream 10.0kb upstream 11480 true Chr5: 8846997-8858476 Arabidopsis thaliana
AT5G25450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8846997-8856996 Arabidopsis thaliana
AT5G25450 10.0kb downstream 10.0kb downstream 11480 true Chr5: 8856997-8868476 Arabidopsis thaliana
AT5G25450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8858477-8868476 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372776 5261 Brassicaceae View MSA
123833893 5264 Brassicales-Malvales View MSA
124351343 5266 SBM View MSA
124249626 5268 Malvidae View MSA
124067790 5270 Rosid View MSA
123746712 5271 Pentapetalae View MSA
122797762 5272 Eudicot View MSA
122041783 5273 Angiosperm View MSA
121351624 5274 Embryophyte View MSA
123425123 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.571       High
cufflinks 0.316     Low  
cufflinks 0.128     Low Low
cufflinks 0.475        
cufflinks 0.29        
cufflinks 0.424        

0 Strain