Gene : AT5G25280 A. thaliana TAIR10
Defline:  serine-rich protein-related Genomic Order:  2419
Name:  ? AT5G25280 Secondary Identifier:  ? PAC:19665733
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25280 0.5kb upstream 0.5kb upstream 2712 true Chr5: 8773289-8776000 Arabidopsis thaliana
AT5G25280 0.5kb upstream 0.5kb upstream 500 false Chr5: 8773289-8773788 Arabidopsis thaliana
AT5G25280 0.5kb downstream 0.5kb downstream 2712 true Chr5: 8773789-8776500 Arabidopsis thaliana
AT5G25280 0.5kb downstream 0.5kb downstream 500 false Chr5: 8776001-8776500 Arabidopsis thaliana
AT5G25280 1.0kb upstream 1.0kb upstream 3212 true Chr5: 8772789-8776000 Arabidopsis thaliana
AT5G25280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8772789-8773788 Arabidopsis thaliana
AT5G25280 1.0kb downstream 1.0kb downstream 3212 true Chr5: 8773789-8777000 Arabidopsis thaliana
AT5G25280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8776001-8777000 Arabidopsis thaliana
AT5G25280 2.0kb upstream 2.0kb upstream 4212 true Chr5: 8771789-8776000 Arabidopsis thaliana
AT5G25280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8771789-8773788 Arabidopsis thaliana
AT5G25280 2.0kb downstream 2.0kb downstream 4212 true Chr5: 8773789-8778000 Arabidopsis thaliana
AT5G25280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8776001-8778000 Arabidopsis thaliana
AT5G25280 5.0kb upstream 5.0kb upstream 7212 true Chr5: 8768789-8776000 Arabidopsis thaliana
AT5G25280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8768789-8773788 Arabidopsis thaliana
AT5G25280 5.0kb downstream 5.0kb downstream 7212 true Chr5: 8773789-8781000 Arabidopsis thaliana
AT5G25280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8776001-8781000 Arabidopsis thaliana
AT5G25280 10.0kb upstream 10.0kb upstream 12212 true Chr5: 8763789-8776000 Arabidopsis thaliana
AT5G25280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8763789-8773788 Arabidopsis thaliana
AT5G25280 10.0kb downstream 10.0kb downstream 12212 true Chr5: 8773789-8786000 Arabidopsis thaliana
AT5G25280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8776001-8786000 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375975 5261 Brassicaceae View MSA
123840229 5264 Brassicales-Malvales View MSA
124349285 5266 SBM View MSA
124254015 5268 Malvidae View MSA
124073291 5270 Rosid View MSA
123746276 5271 Pentapetalae View MSA
122792590 5272 Eudicot View MSA
122050175 5273 Angiosperm View MSA
121348989 5274 Embryophyte View MSA
123381114 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.98     High High
cufflinks 25.299        
cufflinks 29.031     High  
cufflinks 28.607        
cufflinks 42.925     High  
cufflinks 21.625       Low

0 Strain