Gene : AT5G25340 A. thaliana TAIR10
Defline:  Ubiquitin-like superfamily protein Genomic Order:  2425
Name:  ? AT5G25340 Secondary Identifier:  ? PAC:19666522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25340 0.5kb upstream 0.5kb upstream 2267 true Chr5: 8792518-8794784 Arabidopsis thaliana
AT5G25340 0.5kb upstream 0.5kb upstream 500 false Chr5: 8792518-8793017 Arabidopsis thaliana
AT5G25340 0.5kb downstream 0.5kb downstream 2267 true Chr5: 8793018-8795284 Arabidopsis thaliana
AT5G25340 0.5kb downstream 0.5kb downstream 500 false Chr5: 8794785-8795284 Arabidopsis thaliana
AT5G25340 1.0kb upstream 1.0kb upstream 2767 true Chr5: 8792018-8794784 Arabidopsis thaliana
AT5G25340 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8792018-8793017 Arabidopsis thaliana
AT5G25340 1.0kb downstream 1.0kb downstream 2767 true Chr5: 8793018-8795784 Arabidopsis thaliana
AT5G25340 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8794785-8795784 Arabidopsis thaliana
AT5G25340 2.0kb upstream 2.0kb upstream 3767 true Chr5: 8791018-8794784 Arabidopsis thaliana
AT5G25340 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8791018-8793017 Arabidopsis thaliana
AT5G25340 2.0kb downstream 2.0kb downstream 3767 true Chr5: 8793018-8796784 Arabidopsis thaliana
AT5G25340 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8794785-8796784 Arabidopsis thaliana
AT5G25340 5.0kb upstream 5.0kb upstream 6767 true Chr5: 8788018-8794784 Arabidopsis thaliana
AT5G25340 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8788018-8793017 Arabidopsis thaliana
AT5G25340 5.0kb downstream 5.0kb downstream 6767 true Chr5: 8793018-8799784 Arabidopsis thaliana
AT5G25340 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8794785-8799784 Arabidopsis thaliana
AT5G25340 10.0kb upstream 10.0kb upstream 11767 true Chr5: 8783018-8794784 Arabidopsis thaliana
AT5G25340 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8783018-8793017 Arabidopsis thaliana
AT5G25340 10.0kb downstream 10.0kb downstream 11767 true Chr5: 8793018-8804784 Arabidopsis thaliana
AT5G25340 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8794785-8804784 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375202 5261 Brassicaceae View MSA
123842802 5264 Brassicales-Malvales View MSA
124323787 5266 SBM View MSA
124253494 5268 Malvidae View MSA
124068722 5270 Rosid View MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain