Gene : AT5G25310 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11062//PTHR11062:SF43 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  2422
Name:  ? AT5G25310 Secondary Identifier:  ? PAC:19667291
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5980 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25310 0.5kb upstream 0.5kb upstream 3047 true Chr5: 8784320-8787366 Arabidopsis thaliana
AT5G25310 0.5kb upstream 0.5kb upstream 500 false Chr5: 8784320-8784819 Arabidopsis thaliana
AT5G25310 0.5kb downstream 0.5kb downstream 3047 true Chr5: 8784820-8787866 Arabidopsis thaliana
AT5G25310 0.5kb downstream 0.5kb downstream 500 false Chr5: 8787367-8787866 Arabidopsis thaliana
AT5G25310 1.0kb upstream 1.0kb upstream 3547 true Chr5: 8783820-8787366 Arabidopsis thaliana
AT5G25310 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8783820-8784819 Arabidopsis thaliana
AT5G25310 1.0kb downstream 1.0kb downstream 3547 true Chr5: 8784820-8788366 Arabidopsis thaliana
AT5G25310 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8787367-8788366 Arabidopsis thaliana
AT5G25310 2.0kb upstream 2.0kb upstream 4547 true Chr5: 8782820-8787366 Arabidopsis thaliana
AT5G25310 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8782820-8784819 Arabidopsis thaliana
AT5G25310 2.0kb downstream 2.0kb downstream 4547 true Chr5: 8784820-8789366 Arabidopsis thaliana
AT5G25310 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8787367-8789366 Arabidopsis thaliana
AT5G25310 5.0kb upstream 5.0kb upstream 7547 true Chr5: 8779820-8787366 Arabidopsis thaliana
AT5G25310 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8779820-8784819 Arabidopsis thaliana
AT5G25310 5.0kb downstream 5.0kb downstream 7547 true Chr5: 8784820-8792366 Arabidopsis thaliana
AT5G25310 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8787367-8792366 Arabidopsis thaliana
AT5G25310 10.0kb upstream 10.0kb upstream 12547 true Chr5: 8774820-8787366 Arabidopsis thaliana
AT5G25310 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8774820-8784819 Arabidopsis thaliana
AT5G25310 10.0kb downstream 10.0kb downstream 12547 true Chr5: 8784820-8797366 Arabidopsis thaliana
AT5G25310 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8787367-8797366 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368548 5261 Brassicaceae View MSA
123828903 5264 Brassicales-Malvales View MSA
124339349 5266 SBM View MSA
124238914 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low  
cufflinks 0.19     Low  
cufflinks 0.012     Low Low
cufflinks 0.404     Low High
cufflinks 0.038     Low  
cufflinks 0.265     Low  

0 Strain