Gene : CYCA2;1 A. thaliana TAIR10
Primary Identifier:  ? AT5G25380 Defline:  (1 of 2) PTHR10177//PTHR10177:SF212 - CYCLINE // CYCLIN-A2-1-RELATED
Genomic Order:  2429 Name:  ? AT5G25380
Secondary Identifier:  ? PAC:19665524
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25380 0.5kb upstream 0.5kb upstream 2837 true Chr5: 8814730-8817566 Arabidopsis thaliana
AT5G25380 0.5kb upstream 0.5kb upstream 500 false Chr5: 8814730-8815229 Arabidopsis thaliana
AT5G25380 0.5kb downstream 0.5kb downstream 2837 true Chr5: 8815230-8818066 Arabidopsis thaliana
AT5G25380 0.5kb downstream 0.5kb downstream 500 false Chr5: 8817567-8818066 Arabidopsis thaliana
AT5G25380 1.0kb upstream 1.0kb upstream 3337 true Chr5: 8814230-8817566 Arabidopsis thaliana
AT5G25380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8814230-8815229 Arabidopsis thaliana
AT5G25380 1.0kb downstream 1.0kb downstream 3337 true Chr5: 8815230-8818566 Arabidopsis thaliana
AT5G25380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8817567-8818566 Arabidopsis thaliana
AT5G25380 2.0kb upstream 2.0kb upstream 4337 true Chr5: 8813230-8817566 Arabidopsis thaliana
AT5G25380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8813230-8815229 Arabidopsis thaliana
AT5G25380 2.0kb downstream 2.0kb downstream 4337 true Chr5: 8815230-8819566 Arabidopsis thaliana
AT5G25380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8817567-8819566 Arabidopsis thaliana
AT5G25380 5.0kb upstream 5.0kb upstream 7337 true Chr5: 8810230-8817566 Arabidopsis thaliana
AT5G25380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8810230-8815229 Arabidopsis thaliana
AT5G25380 5.0kb downstream 5.0kb downstream 7337 true Chr5: 8815230-8822566 Arabidopsis thaliana
AT5G25380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8817567-8822566 Arabidopsis thaliana
AT5G25380 10.0kb upstream 10.0kb upstream 12337 true Chr5: 8805230-8817566 Arabidopsis thaliana
AT5G25380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8805230-8815229 Arabidopsis thaliana
AT5G25380 10.0kb downstream 10.0kb downstream 12337 true Chr5: 8815230-8827566 Arabidopsis thaliana
AT5G25380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8817567-8827566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369334 5261 Brassicaceae View MSA
123838301 5264 Brassicales-Malvales View MSA
124340926 5266 SBM View MSA
124244332 5268 Malvidae View MSA
124065814 5270 Rosid View MSA
123746110 5271 Pentapetalae View MSA
122796244 5272 Eudicot View MSA
122045619 5273 Angiosperm View MSA
123429011 5275 Viridiplantae View MSA
121349586 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165     Low  
cufflinks 0.447        
cufflinks 0.113     Low Low
cufflinks 0.611        
cufflinks 0.108     Low Low
cufflinks 0.662       High

0 Strain