Gene : AT5G25080 A. thaliana TAIR10
Defline:  (1 of 1) K12592 - exosome complex protein LRP1 (C1D, LRP1) Genomic Order:  2397
Name:  ? AT5G25080 Secondary Identifier:  ? PAC:19672514
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G25080 0.5kb upstream 0.5kb upstream 3887 true Chr5: 8643172-8647058 Arabidopsis thaliana
AT5G25080 0.5kb upstream 0.5kb upstream 500 false Chr5: 8643172-8643671 Arabidopsis thaliana
AT5G25080 0.5kb downstream 0.5kb downstream 3887 true Chr5: 8643672-8647558 Arabidopsis thaliana
AT5G25080 0.5kb downstream 0.5kb downstream 500 false Chr5: 8647059-8647558 Arabidopsis thaliana
AT5G25080 1.0kb upstream 1.0kb upstream 4387 true Chr5: 8642672-8647058 Arabidopsis thaliana
AT5G25080 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8642672-8643671 Arabidopsis thaliana
AT5G25080 1.0kb downstream 1.0kb downstream 4387 true Chr5: 8643672-8648058 Arabidopsis thaliana
AT5G25080 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8647059-8648058 Arabidopsis thaliana
AT5G25080 2.0kb upstream 2.0kb upstream 5387 true Chr5: 8641672-8647058 Arabidopsis thaliana
AT5G25080 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8641672-8643671 Arabidopsis thaliana
AT5G25080 2.0kb downstream 2.0kb downstream 5387 true Chr5: 8643672-8649058 Arabidopsis thaliana
AT5G25080 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8647059-8649058 Arabidopsis thaliana
AT5G25080 5.0kb upstream 5.0kb upstream 8387 true Chr5: 8638672-8647058 Arabidopsis thaliana
AT5G25080 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8638672-8643671 Arabidopsis thaliana
AT5G25080 5.0kb downstream 5.0kb downstream 8387 true Chr5: 8643672-8652058 Arabidopsis thaliana
AT5G25080 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8647059-8652058 Arabidopsis thaliana
AT5G25080 10.0kb upstream 10.0kb upstream 13387 true Chr5: 8633672-8647058 Arabidopsis thaliana
AT5G25080 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8633672-8643671 Arabidopsis thaliana
AT5G25080 10.0kb downstream 10.0kb downstream 13387 true Chr5: 8643672-8657058 Arabidopsis thaliana
AT5G25080 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8647059-8657058 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373718 5261 Brassicaceae View MSA
123834179 5264 Brassicales-Malvales View MSA
124341939 5266 SBM View MSA
124240764 5268 Malvidae View MSA
124064707 5270 Rosid View MSA
123740076 5271 Pentapetalae View MSA
122793567 5272 Eudicot View MSA
122042099 5273 Angiosperm View MSA
121346088 5274 Embryophyte View MSA
123425407 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.567        
cufflinks 4.716        
cufflinks 3.829        
cufflinks 4.53        
cufflinks 3.191       Low
cufflinks 4.598        

0 Strain