Gene : AT5G24840 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23417:SF16 - TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE Genomic Order:  2372
Name:  ? AT5G24840 Secondary Identifier:  ? PAC:19670874
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G24840 0.5kb upstream 0.5kb upstream 1757 true Chr5: 8533787-8535543 Arabidopsis thaliana
AT5G24840 0.5kb upstream 0.5kb upstream 500 false Chr5: 8535044-8535543 Arabidopsis thaliana
AT5G24840 0.5kb downstream 0.5kb downstream 1757 true Chr5: 8533287-8535043 Arabidopsis thaliana
AT5G24840 0.5kb downstream 0.5kb downstream 500 false Chr5: 8533287-8533786 Arabidopsis thaliana
AT5G24840 1.0kb upstream 1.0kb upstream 2257 true Chr5: 8533787-8536043 Arabidopsis thaliana
AT5G24840 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8535044-8536043 Arabidopsis thaliana
AT5G24840 1.0kb downstream 1.0kb downstream 2257 true Chr5: 8532787-8535043 Arabidopsis thaliana
AT5G24840 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8532787-8533786 Arabidopsis thaliana
AT5G24840 2.0kb upstream 2.0kb upstream 3257 true Chr5: 8533787-8537043 Arabidopsis thaliana
AT5G24840 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8535044-8537043 Arabidopsis thaliana
AT5G24840 2.0kb downstream 2.0kb downstream 3257 true Chr5: 8531787-8535043 Arabidopsis thaliana
AT5G24840 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8531787-8533786 Arabidopsis thaliana
AT5G24840 5.0kb upstream 5.0kb upstream 6257 true Chr5: 8533787-8540043 Arabidopsis thaliana
AT5G24840 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8535044-8540043 Arabidopsis thaliana
AT5G24840 5.0kb downstream 5.0kb downstream 6257 true Chr5: 8528787-8535043 Arabidopsis thaliana
AT5G24840 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8528787-8533786 Arabidopsis thaliana
AT5G24840 10.0kb upstream 10.0kb upstream 11257 true Chr5: 8533787-8545043 Arabidopsis thaliana
AT5G24840 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8535044-8545043 Arabidopsis thaliana
AT5G24840 10.0kb downstream 10.0kb downstream 11257 true Chr5: 8523787-8535043 Arabidopsis thaliana
AT5G24840 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8523787-8533786 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360676 5261 Brassicaceae View MSA
123831741 5264 Brassicales-Malvales View MSA
124340261 5266 SBM View MSA
124244925 5268 Malvidae View MSA
124061817 5270 Rosid View MSA
123742667 5271 Pentapetalae View MSA
122790265 5272 Eudicot View MSA
122041903 5273 Angiosperm View MSA
121344094 5274 Embryophyte View MSA
123425098 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.273        
cufflinks 8.988        
cufflinks 6.823        
cufflinks 8.802        
cufflinks 6.042       Low
cufflinks 9.812       High

0 Strain