Gene : AT5G24690 A. thaliana TAIR10
Defline:  (1 of 8) PF11891 - Domain of unknown function (DUF3411) (DUF3411) Genomic Order:  2360
Name:  ? AT5G24690 Secondary Identifier:  ? PAC:19670879
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G24690 0.5kb upstream 0.5kb upstream 3795 true Chr5: 8455457-8459251 Arabidopsis thaliana
AT5G24690 0.5kb upstream 0.5kb upstream 500 false Chr5: 8458752-8459251 Arabidopsis thaliana
AT5G24690 0.5kb downstream 0.5kb downstream 3795 true Chr5: 8454957-8458751 Arabidopsis thaliana
AT5G24690 0.5kb downstream 0.5kb downstream 500 false Chr5: 8454957-8455456 Arabidopsis thaliana
AT5G24690 1.0kb upstream 1.0kb upstream 4295 true Chr5: 8455457-8459751 Arabidopsis thaliana
AT5G24690 1.0kb upstream 1.0kb upstream 1000 false Chr5: 8458752-8459751 Arabidopsis thaliana
AT5G24690 1.0kb downstream 1.0kb downstream 4295 true Chr5: 8454457-8458751 Arabidopsis thaliana
AT5G24690 1.0kb downstream 1.0kb downstream 1000 false Chr5: 8454457-8455456 Arabidopsis thaliana
AT5G24690 2.0kb upstream 2.0kb upstream 5295 true Chr5: 8455457-8460751 Arabidopsis thaliana
AT5G24690 2.0kb upstream 2.0kb upstream 2000 false Chr5: 8458752-8460751 Arabidopsis thaliana
AT5G24690 2.0kb downstream 2.0kb downstream 5295 true Chr5: 8453457-8458751 Arabidopsis thaliana
AT5G24690 2.0kb downstream 2.0kb downstream 2000 false Chr5: 8453457-8455456 Arabidopsis thaliana
AT5G24690 5.0kb upstream 5.0kb upstream 8295 true Chr5: 8455457-8463751 Arabidopsis thaliana
AT5G24690 5.0kb upstream 5.0kb upstream 5000 false Chr5: 8458752-8463751 Arabidopsis thaliana
AT5G24690 5.0kb downstream 5.0kb downstream 8295 true Chr5: 8450457-8458751 Arabidopsis thaliana
AT5G24690 5.0kb downstream 5.0kb downstream 5000 false Chr5: 8450457-8455456 Arabidopsis thaliana
AT5G24690 10.0kb upstream 10.0kb upstream 13295 true Chr5: 8455457-8468751 Arabidopsis thaliana
AT5G24690 10.0kb upstream 10.0kb upstream 10000 false Chr5: 8458752-8468751 Arabidopsis thaliana
AT5G24690 10.0kb downstream 10.0kb downstream 13295 true Chr5: 8445457-8458751 Arabidopsis thaliana
AT5G24690 10.0kb downstream 10.0kb downstream 10000 false Chr5: 8445457-8455456 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041223 5273 Angiosperm View MSA
122371446 5261 Brassicaceae View MSA
123829799 5264 Brassicales-Malvales View MSA
124321629 5266 SBM View MSA
124251523 5268 Malvidae View MSA
124061192 5270 Rosid View MSA
123751024 5271 Pentapetalae View MSA
122790871 5272 Eudicot View MSA
121346356 5274 Embryophyte View MSA
123428208 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.353     High  
cufflinks 39.536     High  
cufflinks 66.708     High High
cufflinks 37.499     High  
cufflinks 55.85     High  
cufflinks 31.985     High Low

0 Strain