Gene : CYSD2 A. thaliana TAIR10
Primary Identifier:  ? AT5G28020 Defline:  (1 of 3) 2.5.1.47//4.4.1.9 - Cysteine synthase / OAS sulfhydrylase // L-3-cyanoalanine synthase / Beta-cyanoalanine synthase
Genomic Order:  2681 Name:  ? AT5G28020
Secondary Identifier:  ? PAC:19672730
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ASPSYNII-PWY Arabidopsis thaliana pathologic  
Athaliana CYSTSYN-PWY Arabidopsis thaliana pathologic  
Athaliana P401-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6936 Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G28020 0.5kb upstream 0.5kb upstream 2898 true Chr5: 10026183-10029080 Arabidopsis thaliana
AT5G28020 0.5kb upstream 0.5kb upstream 500 false Chr5: 10028581-10029080 Arabidopsis thaliana
AT5G28020 0.5kb downstream 0.5kb downstream 2898 true Chr5: 10025683-10028580 Arabidopsis thaliana
AT5G28020 0.5kb downstream 0.5kb downstream 500 false Chr5: 10025683-10026182 Arabidopsis thaliana
AT5G28020 1.0kb upstream 1.0kb upstream 3398 true Chr5: 10026183-10029580 Arabidopsis thaliana
AT5G28020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 10028581-10029580 Arabidopsis thaliana
AT5G28020 1.0kb downstream 1.0kb downstream 3398 true Chr5: 10025183-10028580 Arabidopsis thaliana
AT5G28020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 10025183-10026182 Arabidopsis thaliana
AT5G28020 2.0kb upstream 2.0kb upstream 4398 true Chr5: 10026183-10030580 Arabidopsis thaliana
AT5G28020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 10028581-10030580 Arabidopsis thaliana
AT5G28020 2.0kb downstream 2.0kb downstream 4398 true Chr5: 10024183-10028580 Arabidopsis thaliana
AT5G28020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 10024183-10026182 Arabidopsis thaliana
AT5G28020 5.0kb upstream 5.0kb upstream 7398 true Chr5: 10026183-10033580 Arabidopsis thaliana
AT5G28020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 10028581-10033580 Arabidopsis thaliana
AT5G28020 5.0kb downstream 5.0kb downstream 7398 true Chr5: 10021183-10028580 Arabidopsis thaliana
AT5G28020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 10021183-10026182 Arabidopsis thaliana
AT5G28020 10.0kb upstream 10.0kb upstream 12398 true Chr5: 10026183-10038580 Arabidopsis thaliana
AT5G28020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 10028581-10038580 Arabidopsis thaliana
AT5G28020 10.0kb downstream 10.0kb downstream 12398 true Chr5: 10016183-10028580 Arabidopsis thaliana
AT5G28020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 10016183-10026182 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363592 5261 Brassicaceae View MSA
123798573 5264 Brassicales-Malvales View MSA
124351332 5266 SBM View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.425        
cufflinks 0.762       Low
cufflinks 4.531       High
cufflinks 1.608        
cufflinks 4.388       High
cufflinks 0.939        

0 Strain