Gene : EMB2775 A. thaliana TAIR10
Primary Identifier:  ? AT5G27740 Defline:  (1 of 1) PTHR11669//PTHR11669:SF1 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 3
Genomic Order:  2650 Name:  ? AT5G27740
Secondary Identifier:  ? PAC:19672656
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27740 0.5kb upstream 0.5kb upstream 3886 true Chr5: 9823179-9827064 Arabidopsis thaliana
AT5G27740 0.5kb upstream 0.5kb upstream 500 false Chr5: 9823179-9823678 Arabidopsis thaliana
AT5G27740 0.5kb downstream 0.5kb downstream 3886 true Chr5: 9823679-9827564 Arabidopsis thaliana
AT5G27740 0.5kb downstream 0.5kb downstream 500 false Chr5: 9827065-9827564 Arabidopsis thaliana
AT5G27740 1.0kb upstream 1.0kb upstream 4386 true Chr5: 9822679-9827064 Arabidopsis thaliana
AT5G27740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9822679-9823678 Arabidopsis thaliana
AT5G27740 1.0kb downstream 1.0kb downstream 4386 true Chr5: 9823679-9828064 Arabidopsis thaliana
AT5G27740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9827065-9828064 Arabidopsis thaliana
AT5G27740 2.0kb upstream 2.0kb upstream 5386 true Chr5: 9821679-9827064 Arabidopsis thaliana
AT5G27740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9821679-9823678 Arabidopsis thaliana
AT5G27740 2.0kb downstream 2.0kb downstream 5386 true Chr5: 9823679-9829064 Arabidopsis thaliana
AT5G27740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9827065-9829064 Arabidopsis thaliana
AT5G27740 5.0kb upstream 5.0kb upstream 8386 true Chr5: 9818679-9827064 Arabidopsis thaliana
AT5G27740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9818679-9823678 Arabidopsis thaliana
AT5G27740 5.0kb downstream 5.0kb downstream 8386 true Chr5: 9823679-9832064 Arabidopsis thaliana
AT5G27740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9827065-9832064 Arabidopsis thaliana
AT5G27740 10.0kb upstream 10.0kb upstream 13386 true Chr5: 9813679-9827064 Arabidopsis thaliana
AT5G27740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9813679-9823678 Arabidopsis thaliana
AT5G27740 10.0kb downstream 10.0kb downstream 13386 true Chr5: 9823679-9837064 Arabidopsis thaliana
AT5G27740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9827065-9837064 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363772 5261 Brassicaceae View MSA
123827915 5264 Brassicales-Malvales View MSA
124341538 5266 SBM View MSA
124242698 5268 Malvidae View MSA
124061589 5270 Rosid View MSA
123739027 5271 Pentapetalae View MSA
122788068 5272 Eudicot View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.832        
cufflinks 11.744       High
cufflinks 7.709        
cufflinks 11.376        
cufflinks 7.225       Low
cufflinks 10.919        

0 Strain