Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT5G27810 0.5kb upstream | 0.5kb | upstream | 860 | true | Chr5: 9855327-9856186 | Arabidopsis thaliana |
AT5G27810 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr5: 9855327-9855826 | Arabidopsis thaliana |
AT5G27810 0.5kb downstream | 0.5kb | downstream | 860 | true | Chr5: 9855827-9856686 | Arabidopsis thaliana |
AT5G27810 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr5: 9856187-9856686 | Arabidopsis thaliana |
AT5G27810 1.0kb upstream | 1.0kb | upstream | 1360 | true | Chr5: 9854827-9856186 | Arabidopsis thaliana |
AT5G27810 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr5: 9854827-9855826 | Arabidopsis thaliana |
AT5G27810 1.0kb downstream | 1.0kb | downstream | 1360 | true | Chr5: 9855827-9857186 | Arabidopsis thaliana |
AT5G27810 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr5: 9856187-9857186 | Arabidopsis thaliana |
AT5G27810 2.0kb upstream | 2.0kb | upstream | 2360 | true | Chr5: 9853827-9856186 | Arabidopsis thaliana |
AT5G27810 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr5: 9853827-9855826 | Arabidopsis thaliana |
AT5G27810 2.0kb downstream | 2.0kb | downstream | 2360 | true | Chr5: 9855827-9858186 | Arabidopsis thaliana |
AT5G27810 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr5: 9856187-9858186 | Arabidopsis thaliana |
AT5G27810 5.0kb upstream | 5.0kb | upstream | 5360 | true | Chr5: 9850827-9856186 | Arabidopsis thaliana |
AT5G27810 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr5: 9850827-9855826 | Arabidopsis thaliana |
AT5G27810 5.0kb downstream | 5.0kb | downstream | 5360 | true | Chr5: 9855827-9861186 | Arabidopsis thaliana |
AT5G27810 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr5: 9856187-9861186 | Arabidopsis thaliana |
AT5G27810 10.0kb upstream | 10.0kb | upstream | 10360 | true | Chr5: 9845827-9856186 | Arabidopsis thaliana |
AT5G27810 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr5: 9845827-9855826 | Arabidopsis thaliana |
AT5G27810 10.0kb downstream | 10.0kb | downstream | 10360 | true | Chr5: 9855827-9866186 | Arabidopsis thaliana |
AT5G27810 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr5: 9856187-9866186 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122330931 | 5261 | Brassicaceae | Singleton cluster - no MSA |
123772148 | 5264 | Brassicales-Malvales | Singleton cluster - no MSA |
124270669 | 5266 | SBM | Singleton cluster - no MSA |
124254245 | 5268 | Malvidae | View MSA |
124074630 | 5270 | Rosid | View MSA |
123753664 | 5271 | Pentapetalae | View MSA |
122797561 | 5272 | Eudicot | View MSA |
122050867 | 5273 | Angiosperm | View MSA |
121350957 | 5274 | Embryophyte | View MSA |
123424057 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.078 | Low | |||
cufflinks | 0.422 | High | |||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.044 | Low | |||
cufflinks | 0.085 | Low |