Gene : AT5G27770 A. thaliana TAIR10
Defline:  (1 of 3) K02891 - large subunit ribosomal protein L22e (RP-L22e, RPL22) Genomic Order:  2653
Name:  ? AT5G27770 Secondary Identifier:  ? PAC:19668600
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27770 0.5kb upstream 0.5kb upstream 1957 true Chr5: 9835385-9837341 Arabidopsis thaliana
AT5G27770 0.5kb upstream 0.5kb upstream 500 false Chr5: 9835385-9835884 Arabidopsis thaliana
AT5G27770 0.5kb downstream 0.5kb downstream 1957 true Chr5: 9835885-9837841 Arabidopsis thaliana
AT5G27770 0.5kb downstream 0.5kb downstream 500 false Chr5: 9837342-9837841 Arabidopsis thaliana
AT5G27770 1.0kb upstream 1.0kb upstream 2457 true Chr5: 9834885-9837341 Arabidopsis thaliana
AT5G27770 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9834885-9835884 Arabidopsis thaliana
AT5G27770 1.0kb downstream 1.0kb downstream 2457 true Chr5: 9835885-9838341 Arabidopsis thaliana
AT5G27770 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9837342-9838341 Arabidopsis thaliana
AT5G27770 2.0kb upstream 2.0kb upstream 3457 true Chr5: 9833885-9837341 Arabidopsis thaliana
AT5G27770 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9833885-9835884 Arabidopsis thaliana
AT5G27770 2.0kb downstream 2.0kb downstream 3457 true Chr5: 9835885-9839341 Arabidopsis thaliana
AT5G27770 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9837342-9839341 Arabidopsis thaliana
AT5G27770 5.0kb upstream 5.0kb upstream 6457 true Chr5: 9830885-9837341 Arabidopsis thaliana
AT5G27770 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9830885-9835884 Arabidopsis thaliana
AT5G27770 5.0kb downstream 5.0kb downstream 6457 true Chr5: 9835885-9842341 Arabidopsis thaliana
AT5G27770 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9837342-9842341 Arabidopsis thaliana
AT5G27770 10.0kb upstream 10.0kb upstream 11457 true Chr5: 9825885-9837341 Arabidopsis thaliana
AT5G27770 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9825885-9835884 Arabidopsis thaliana
AT5G27770 10.0kb downstream 10.0kb downstream 11457 true Chr5: 9835885-9847341 Arabidopsis thaliana
AT5G27770 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9837342-9847341 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380330 5261 Brassicaceae View MSA
123840472 5264 Brassicales-Malvales View MSA
124339112 5266 SBM View MSA
124244109 5268 Malvidae View MSA
124073965 5270 Rosid View MSA
123748426 5271 Pentapetalae View MSA
122787714 5272 Eudicot View MSA
122045649 5273 Angiosperm View MSA
121348582 5274 Embryophyte View MSA
123423882 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.851     High  
cufflinks 121.142     High  
cufflinks 66.661     High  
cufflinks 111.777     High  
cufflinks 50.187     High Low
cufflinks 129.68     High High

0 Strain