Gene : AT5G27650 A. thaliana TAIR10
Defline:  (1 of 2) K17398 - DNA (cytosine-5)-methyltransferase 3A (DNMT3A) Genomic Order:  2641
Name:  ? AT5G27650 Secondary Identifier:  ? PAC:19667694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27650 0.5kb upstream 0.5kb upstream 4326 true Chr5: 9784907-9789232 Arabidopsis thaliana
AT5G27650 0.5kb upstream 0.5kb upstream 500 false Chr5: 9784907-9785406 Arabidopsis thaliana
AT5G27650 0.5kb downstream 0.5kb downstream 4326 true Chr5: 9785407-9789732 Arabidopsis thaliana
AT5G27650 0.5kb downstream 0.5kb downstream 500 false Chr5: 9789233-9789732 Arabidopsis thaliana
AT5G27650 1.0kb upstream 1.0kb upstream 4826 true Chr5: 9784407-9789232 Arabidopsis thaliana
AT5G27650 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9784407-9785406 Arabidopsis thaliana
AT5G27650 1.0kb downstream 1.0kb downstream 4826 true Chr5: 9785407-9790232 Arabidopsis thaliana
AT5G27650 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9789233-9790232 Arabidopsis thaliana
AT5G27650 2.0kb upstream 2.0kb upstream 5826 true Chr5: 9783407-9789232 Arabidopsis thaliana
AT5G27650 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9783407-9785406 Arabidopsis thaliana
AT5G27650 2.0kb downstream 2.0kb downstream 5826 true Chr5: 9785407-9791232 Arabidopsis thaliana
AT5G27650 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9789233-9791232 Arabidopsis thaliana
AT5G27650 5.0kb upstream 5.0kb upstream 8826 true Chr5: 9780407-9789232 Arabidopsis thaliana
AT5G27650 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9780407-9785406 Arabidopsis thaliana
AT5G27650 5.0kb downstream 5.0kb downstream 8826 true Chr5: 9785407-9794232 Arabidopsis thaliana
AT5G27650 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9789233-9794232 Arabidopsis thaliana
AT5G27650 10.0kb upstream 10.0kb upstream 13826 true Chr5: 9775407-9789232 Arabidopsis thaliana
AT5G27650 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9775407-9785406 Arabidopsis thaliana
AT5G27650 10.0kb downstream 10.0kb downstream 13826 true Chr5: 9785407-9799232 Arabidopsis thaliana
AT5G27650 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9789233-9799232 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367672 5261 Brassicaceae View MSA
123828538 5264 Brassicales-Malvales View MSA
124337445 5266 SBM View MSA
124244415 5268 Malvidae View MSA
124067210 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.123        
cufflinks 7.491        
cufflinks 7.1       Low
cufflinks 9.066        
cufflinks 7.63        
cufflinks 8.874        

0 Strain