Gene : AT5G27430 A. thaliana TAIR10
Defline:  (1 of 2) K12948 - signal peptidase complex subunit 3 (SPCS3, SPC3) Genomic Order:  2620
Name:  ? AT5G27430 Secondary Identifier:  ? PAC:19670271
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27430 0.5kb upstream 0.5kb upstream 2543 true Chr5: 9686878-9689420 Arabidopsis thaliana
AT5G27430 0.5kb upstream 0.5kb upstream 500 false Chr5: 9686878-9687377 Arabidopsis thaliana
AT5G27430 0.5kb downstream 0.5kb downstream 2543 true Chr5: 9687378-9689920 Arabidopsis thaliana
AT5G27430 0.5kb downstream 0.5kb downstream 500 false Chr5: 9689421-9689920 Arabidopsis thaliana
AT5G27430 1.0kb upstream 1.0kb upstream 3043 true Chr5: 9686378-9689420 Arabidopsis thaliana
AT5G27430 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9686378-9687377 Arabidopsis thaliana
AT5G27430 1.0kb downstream 1.0kb downstream 3043 true Chr5: 9687378-9690420 Arabidopsis thaliana
AT5G27430 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9689421-9690420 Arabidopsis thaliana
AT5G27430 2.0kb upstream 2.0kb upstream 4043 true Chr5: 9685378-9689420 Arabidopsis thaliana
AT5G27430 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9685378-9687377 Arabidopsis thaliana
AT5G27430 2.0kb downstream 2.0kb downstream 4043 true Chr5: 9687378-9691420 Arabidopsis thaliana
AT5G27430 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9689421-9691420 Arabidopsis thaliana
AT5G27430 5.0kb upstream 5.0kb upstream 7043 true Chr5: 9682378-9689420 Arabidopsis thaliana
AT5G27430 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9682378-9687377 Arabidopsis thaliana
AT5G27430 5.0kb downstream 5.0kb downstream 7043 true Chr5: 9687378-9694420 Arabidopsis thaliana
AT5G27430 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9689421-9694420 Arabidopsis thaliana
AT5G27430 10.0kb upstream 10.0kb upstream 12043 true Chr5: 9677378-9689420 Arabidopsis thaliana
AT5G27430 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9677378-9687377 Arabidopsis thaliana
AT5G27430 10.0kb downstream 10.0kb downstream 12043 true Chr5: 9687378-9699420 Arabidopsis thaliana
AT5G27430 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9689421-9699420 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377083 5261 Brassicaceae View MSA
123839955 5264 Brassicales-Malvales View MSA
124347240 5266 SBM View MSA
124241687 5268 Malvidae View MSA
124062691 5270 Rosid View MSA
123748290 5271 Pentapetalae View MSA
122794035 5272 Eudicot View MSA
122042946 5273 Angiosperm View MSA
121344173 5274 Embryophyte View MSA
123424952 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.669        
cufflinks 15.538       High
cufflinks 7.202       Low
cufflinks 14.549        
cufflinks 8.323        
cufflinks 14.104        

0 Strain