Gene : AT5G27395 A. thaliana TAIR10
Defline:  (1 of 1) K17426 - large subunit ribosomal protein L45 (MRPL45) Genomic Order:  2615
Name:  ? AT5G27395 Secondary Identifier:  ? PAC:19671073
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27395 0.5kb upstream 0.5kb upstream 3261 true Chr5: 9671496-9674756 Arabidopsis thaliana
AT5G27395 0.5kb upstream 0.5kb upstream 500 false Chr5: 9674257-9674756 Arabidopsis thaliana
AT5G27395 0.5kb downstream 0.5kb downstream 3261 true Chr5: 9670996-9674256 Arabidopsis thaliana
AT5G27395 0.5kb downstream 0.5kb downstream 500 false Chr5: 9670996-9671495 Arabidopsis thaliana
AT5G27395 1.0kb upstream 1.0kb upstream 3761 true Chr5: 9671496-9675256 Arabidopsis thaliana
AT5G27395 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9674257-9675256 Arabidopsis thaliana
AT5G27395 1.0kb downstream 1.0kb downstream 3761 true Chr5: 9670496-9674256 Arabidopsis thaliana
AT5G27395 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9670496-9671495 Arabidopsis thaliana
AT5G27395 2.0kb upstream 2.0kb upstream 4761 true Chr5: 9671496-9676256 Arabidopsis thaliana
AT5G27395 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9674257-9676256 Arabidopsis thaliana
AT5G27395 2.0kb downstream 2.0kb downstream 4761 true Chr5: 9669496-9674256 Arabidopsis thaliana
AT5G27395 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9669496-9671495 Arabidopsis thaliana
AT5G27395 5.0kb upstream 5.0kb upstream 7761 true Chr5: 9671496-9679256 Arabidopsis thaliana
AT5G27395 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9674257-9679256 Arabidopsis thaliana
AT5G27395 5.0kb downstream 5.0kb downstream 7761 true Chr5: 9666496-9674256 Arabidopsis thaliana
AT5G27395 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9666496-9671495 Arabidopsis thaliana
AT5G27395 10.0kb upstream 10.0kb upstream 12761 true Chr5: 9671496-9684256 Arabidopsis thaliana
AT5G27395 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9674257-9684256 Arabidopsis thaliana
AT5G27395 10.0kb downstream 10.0kb downstream 12761 true Chr5: 9661496-9674256 Arabidopsis thaliana
AT5G27395 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9661496-9671495 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374514 5261 Brassicaceae View MSA
123834875 5264 Brassicales-Malvales View MSA
124342475 5266 SBM View MSA
124242210 5268 Malvidae View MSA
124050340 5270 Rosid View MSA
123738345 5271 Pentapetalae View MSA
122792875 5272 Eudicot View MSA
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.622        
cufflinks 4.319        
cufflinks 3.768        
cufflinks 4.155        
cufflinks 3.022       Low
cufflinks 4.944       High

0 Strain