Gene : AT5G27260 A. thaliana TAIR10
Defline:  (1 of 14) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Genomic Order:  2602
Name:  ? AT5G27260 Secondary Identifier:  ? PAC:19673170
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27260 0.5kb upstream 0.5kb upstream 1488 true Chr5: 9603443-9604930 Arabidopsis thaliana
AT5G27260 0.5kb upstream 0.5kb upstream 500 false Chr5: 9603443-9603942 Arabidopsis thaliana
AT5G27260 0.5kb downstream 0.5kb downstream 1488 true Chr5: 9603943-9605430 Arabidopsis thaliana
AT5G27260 0.5kb downstream 0.5kb downstream 500 false Chr5: 9604931-9605430 Arabidopsis thaliana
AT5G27260 1.0kb upstream 1.0kb upstream 1988 true Chr5: 9602943-9604930 Arabidopsis thaliana
AT5G27260 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9602943-9603942 Arabidopsis thaliana
AT5G27260 1.0kb downstream 1.0kb downstream 1988 true Chr5: 9603943-9605930 Arabidopsis thaliana
AT5G27260 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9604931-9605930 Arabidopsis thaliana
AT5G27260 2.0kb upstream 2.0kb upstream 2988 true Chr5: 9601943-9604930 Arabidopsis thaliana
AT5G27260 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9601943-9603942 Arabidopsis thaliana
AT5G27260 2.0kb downstream 2.0kb downstream 2988 true Chr5: 9603943-9606930 Arabidopsis thaliana
AT5G27260 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9604931-9606930 Arabidopsis thaliana
AT5G27260 5.0kb upstream 5.0kb upstream 5988 true Chr5: 9598943-9604930 Arabidopsis thaliana
AT5G27260 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9598943-9603942 Arabidopsis thaliana
AT5G27260 5.0kb downstream 5.0kb downstream 5988 true Chr5: 9603943-9609930 Arabidopsis thaliana
AT5G27260 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9604931-9609930 Arabidopsis thaliana
AT5G27260 10.0kb upstream 10.0kb upstream 10988 true Chr5: 9593943-9604930 Arabidopsis thaliana
AT5G27260 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9593943-9603942 Arabidopsis thaliana
AT5G27260 10.0kb downstream 10.0kb downstream 10988 true Chr5: 9603943-9614930 Arabidopsis thaliana
AT5G27260 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9604931-9614930 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380496 5261 Brassicaceae View MSA
123835198 5264 Brassicales-Malvales View MSA
124346756 5266 SBM View MSA
124250568 5268 Malvidae View MSA
124072916 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.98        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.808        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.144     Low Low

0 Strain