Gene : TPR3 A. thaliana TAIR10
Primary Identifier:  ? AT5G27030 Defline:  (1 of 2) PTHR22847//PTHR22847:SF424 - WD40 REPEAT PROTEIN // TOPLESS-RELATED PROTEIN 2-RELATED
Genomic Order:  2582 Name:  ? AT5G27030
Secondary Identifier:  ? PAC:19669849
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G27030 0.5kb upstream 0.5kb upstream 7190 true Chr5: 9508718-9515907 Arabidopsis thaliana
AT5G27030 0.5kb upstream 0.5kb upstream 500 false Chr5: 9515408-9515907 Arabidopsis thaliana
AT5G27030 0.5kb downstream 0.5kb downstream 7190 true Chr5: 9508218-9515407 Arabidopsis thaliana
AT5G27030 0.5kb downstream 0.5kb downstream 500 false Chr5: 9508218-9508717 Arabidopsis thaliana
AT5G27030 1.0kb upstream 1.0kb upstream 7690 true Chr5: 9508718-9516407 Arabidopsis thaliana
AT5G27030 1.0kb upstream 1.0kb upstream 1000 false Chr5: 9515408-9516407 Arabidopsis thaliana
AT5G27030 1.0kb downstream 1.0kb downstream 7690 true Chr5: 9507718-9515407 Arabidopsis thaliana
AT5G27030 1.0kb downstream 1.0kb downstream 1000 false Chr5: 9507718-9508717 Arabidopsis thaliana
AT5G27030 2.0kb upstream 2.0kb upstream 8690 true Chr5: 9508718-9517407 Arabidopsis thaliana
AT5G27030 2.0kb upstream 2.0kb upstream 2000 false Chr5: 9515408-9517407 Arabidopsis thaliana
AT5G27030 2.0kb downstream 2.0kb downstream 8690 true Chr5: 9506718-9515407 Arabidopsis thaliana
AT5G27030 2.0kb downstream 2.0kb downstream 2000 false Chr5: 9506718-9508717 Arabidopsis thaliana
AT5G27030 5.0kb upstream 5.0kb upstream 11690 true Chr5: 9508718-9520407 Arabidopsis thaliana
AT5G27030 5.0kb upstream 5.0kb upstream 5000 false Chr5: 9515408-9520407 Arabidopsis thaliana
AT5G27030 5.0kb downstream 5.0kb downstream 11690 true Chr5: 9503718-9515407 Arabidopsis thaliana
AT5G27030 5.0kb downstream 5.0kb downstream 5000 false Chr5: 9503718-9508717 Arabidopsis thaliana
AT5G27030 10.0kb upstream 10.0kb upstream 16690 true Chr5: 9508718-9525407 Arabidopsis thaliana
AT5G27030 10.0kb upstream 10.0kb upstream 10000 false Chr5: 9515408-9525407 Arabidopsis thaliana
AT5G27030 10.0kb downstream 10.0kb downstream 16690 true Chr5: 9498718-9515407 Arabidopsis thaliana
AT5G27030 10.0kb downstream 10.0kb downstream 10000 false Chr5: 9498718-9508717 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122378754 5261 Brassicaceae View MSA
123838133 5264 Brassicales-Malvales View MSA
124346934 5266 SBM View MSA
124237070 5268 Malvidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.191        
cufflinks 4.304        
cufflinks 1.135       Low
cufflinks 4.464        
cufflinks 1.336       Low
cufflinks 4.185        

0 Strain